RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-217ENST00000488935 PRR25Q96S07 402 aa12.5□□□□□ -0.41
ERGIC3-217ENST00000488935 P2RX4Q99571 388 aa12.5□□□□□ -0.41
ERGIC3-217ENST00000488935 LINC00574Q9H8X3 128 aa12.5□□□□□ -0.41
ERGIC3-217ENST00000488935 A0A1W2PPK0 400 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 SNTNA6NMZ2 147 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 C15orf65H3BRN8 121 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 SDCBPO00560 298 aaPredicted RBP12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 LALBAP00709 142 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 IGHG2P01859 326 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 MYCNOSP40205 109 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 RAB7AP51149 207 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 RBM11P57052 281 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 DDI2Q5TDH0 399 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 ZNF695Q8IW36 515 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 OR8H3Q8N146 312 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 ZFP41Q8N8Y5 198 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 Q8N9W7 124 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 OR10V1Q8NGI7 309 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 OR52N1Q8NH53 320 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 DPF1Q92782 380 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 HSPB9Q9BQS6 159 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 METTL9Q9H1A3 318 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 PCDHB16Q9NRJ7 776 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 FAM118AQ9NWS6 357 aa12.49□□□□□ -0.41
ERGIC3-217ENST00000488935 LOC100130705A0A1B0GUX0 176 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 CCL24O00175 119 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 FGF16O43320 207 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 GAPDHP04406 335 aaKnown RBP12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 VHLP40337 213 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 GPR12P47775 334 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 F2RL1P55085 397 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 RAB40BQ12829 278 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 SLC22A6Q4U2R8 563 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 Q8NFD4 153 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 TMEM106AQ96A25 262 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 ASCL2Q99929 193 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 B9D2Q9BPU9 175 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 DCLRE1BQ9H816 532 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 CLEC2DQ9UHP7 191 aa12.48□□□□□ -0.41
ERGIC3-217ENST00000488935 HUWE1Q7Z6Z7 4374 aaKnown RBP12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 TMEM30CPA0ZSE6 113 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 CSTBP04080 98 aaKnown RBP12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 ZNF93P35789 620 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 ZNF134P52741 427 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 SLC35B1P78383 322 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 ZNF816Q0VGE8 651 aaPredicted RBP12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 FOXRED2Q8IWF2 684 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 PRR18Q8N4B5 295 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 Q8N6K4 173 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 OR4K15Q8NH41 348 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 OR1L1Q8NH94 360 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 GPR148Q8TDV2 347 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 NCOR1P1Q9H4R4 102 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 PLSCR3Q9NRY6 295 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 ZFP57Q9NU63 452 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 GFOD1Q9NXC2 390 aa12.47□□□□□ -0.41
ERGIC3-217ENST00000488935 PNMA8CA0A1B0GUJ8 204 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 H0YHG0 523 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 WBP4O75554 376 aaKnown RBP12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 MT-ND4P03905 459 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 BDKRB2P30411 391 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 DGCR2P98153 550 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 EBI3Q14213 229 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 RTN4IP1Q8WWV3 396 aaPredicted RBP12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 Q96MT0 163 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 ZNF184Q99676 751 aaPredicted RBP12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 ABCG5Q9H222 651 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 BANF2Q9H503 90 aa12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 RPL36Q9Y3U8 105 aaKnown RBP12.46□□□□□ -0.41
ERGIC3-217ENST00000488935 TRAV8-7A0A075B6U6 113 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 C12orf77C9JDV5 145 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 AIPO00170 330 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 SLC2A2P11168 524 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 GZMHP20718 246 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 MYF6P23409 242 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 GPR50Q13585 617 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 PNLIPRP3Q17RR3 467 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 KLHL22Q53GT1 634 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 RPL22L1Q6P5R6 122 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 TEX38Q6PEX7 206 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 UNQ9370/PRO34162Q6UXP9 181 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 TGIF2LXQ8IUE1 241 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 TMEM104Q8NE00 496 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 OR10A7Q8NGE5 316 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 OR2T10Q8NGZ9 312 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 MUL1Q969V5 352 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 ST6GALNAC6Q969X2 333 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 RITA1Q96K30 269 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 OR5B12Q96R08 314 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 S1PR3Q99500 378 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 S100A13Q99584 98 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 TMEM138Q9NPI0 162 aa12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 MRPS18AQ9NVS2 196 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-217ENST00000488935 AP4M1O00189 453 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 CD2P06729 351 aa12.44□□□□□ -0.42
ERGIC3-217ENST00000488935 RCC1P18754 421 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms