RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 HIST1H1DP16402 221 aaKnown RBP13.06□□□□□ -0.32
HDAC7-224ENST00000488927 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-224ENST00000488927 CDK2P24941 298 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 C17orf58Q2M2W7 97 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 PLAC9Q5JTB6 97 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 UBE2NLQ5JXB2 153 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 MZT2AQ6P582 158 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 OR5H6Q8NGV6 325 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 CCDC107Q8WV48 283 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 DYRK2Q92630 601 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 ABCG5Q9H222 651 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 CHMP1AQ9HD42 196 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-224ENST00000488927 C12orf4Q9NQ89 552 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 DIABLOQ9NR28 239 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 CEPT1Q9Y6K0 416 aa13.06□□□□□ -0.32
HDAC7-224ENST00000488927 TRBV6-6A0A0A6YYG2 114 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 CCDC160A6NGH7 325 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 NPIPB11E5RHQ5 1161 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 H3BMQ9 156 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 ZNF701M0R085 212 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-224ENST00000488927 SPINT2O43291 252 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 NAPSAO96009 420 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 SPCS2Q15005 226 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 MOGAT2Q3SYC2 334 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 MIDNQ504T8 468 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 ZNF782Q6ZMW2 699 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-224ENST00000488927 RTN4RL2Q86UN3 420 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 OR4K15Q8NH41 348 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 MRPL30Q8TCC3 161 aaKnown RBP13.05□□□□□ -0.32
HDAC7-224ENST00000488927 ARL11Q969Q4 196 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 SLC25A38Q96DW6 304 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 S100A16Q96FQ6 103 aaKnown RBP13.05□□□□□ -0.32
HDAC7-224ENST00000488927 CMSS1Q9BQ75 279 aaKnown RBP13.05□□□□□ -0.32
HDAC7-224ENST00000488927 TMEM133Q9H2Q1 129 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC7-224ENST00000488927 MBNL3Q9NUK0 354 aaKnown RBP13.05□□□□□ -0.32
HDAC7-224ENST00000488927 IDI2-AS1Q9NZ38 188 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 ZNF69Q9UC07 566 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 AK3Q9UIJ7 227 aa13.05□□□□□ -0.32
HDAC7-224ENST00000488927 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
HDAC7-224ENST00000488927 IGHV3OR16-10A0A075B7F0 116 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 MFNGO00587 321 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 NPFFO15130 113 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 GSTP1P09211 210 aaKnown RBP13.04□□□□□ -0.32
HDAC7-224ENST00000488927 CD3GP09693 182 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 GNB3P16520 340 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 SSTR5P35346 364 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 PRAMEF5Q5TYX0 476 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 BRD3OSQ6XYD6 125 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 SAMD12Q8N8I0 201 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 OR11H6Q8NGC7 330 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 KIRREL1Q96J84 757 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 SUCNR1Q9BXA5 334 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 CCDC59Q9P031 241 aaKnown RBP13.04□□□□□ -0.32
HDAC7-224ENST00000488927 NDUFA13Q9P0J0 144 aa13.04□□□□□ -0.32
HDAC7-224ENST00000488927 A0A087X0M5 115 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 SMIM31A0A1B0GVY4 71 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 A0A1B0GX30 115 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 C15orf65H3BRN8 121 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 COX7A1P24310 79 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 CD34P28906 385 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 LGALS4P56470 323 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 PITPNAQ00169 270 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 KLRD1Q13241 179 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 PNLIPRP3Q17RR3 467 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 CDNFQ49AH0 187 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 HCP5Q6MZN7 132 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 ZNF880Q6PDB4 577 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 RBMS3Q6XE24 437 aaKnown RBP13.03□□□□□ -0.32
HDAC7-224ENST00000488927 PDZD9Q8IXQ8 264 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 PNKDQ8N490 385 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 OR52M1Q8NGK5 317 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 ZNF418Q8TF45 676 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-224ENST00000488927 CLEC7AQ9BXN2 247 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 COMMD3Q9UBI1 195 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 RSL24D1Q9UHA3 163 aaKnown RBP13.03□□□□□ -0.32
HDAC7-224ENST00000488927 KCNK7Q9Y2U2 307 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 DSCAML1Q8TD84 2053 aa13.03□□□□□ -0.32
HDAC7-224ENST00000488927 A0A075B6Q4 140 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 A0A0A6YYJ9 748 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 IGHV2-26A0A0B4J1V2 119 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 TRAV39A0A0B4J263 110 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 C12orf77C9JDV5 145 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 F2RL2O00254 374 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 MMP23AO75900 390 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 APOA1P02647 267 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 RCC1P18754 421 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-224ENST00000488927 OMGP23515 440 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 TALDO1P37837 337 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 DLX1P56177 255 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 ARFRP1Q13795 201 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 HACD4Q5VWC8 232 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 RUSC1-AS1Q66K80 236 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 ZNF626Q68DY1 528 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 ABHD12Q8N2K0 398 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 RFESDQ8TAC1 157 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 SETD6Q8TBK2 473 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 ZNF596Q8TC21 504 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 DYNC2LI1Q8TCX1 351 aa13.02□□□□□ -0.33
HDAC7-224ENST00000488927 RBM38Q9H0Z9 239 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms