RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 NEK7Q8TDX7 302 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 TOMM40LQ969M1 308 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 RPEQ96AT9 228 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 ORAI1Q96D31 301 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 SLC25A33Q9BSK2 321 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 RAB9BQ9NP90 201 aa11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 MRPS28Q9Y2Q9 187 aaKnown RBP11.07□□□□□ -0.64
SPTLC1-207ENST00000488921 TRAV8-7A0A075B6U6 113 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 LY6LH3BQJ8 138 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 J3QR06 171 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 M0QZK8 103 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 OR2F2O95006 317 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 GZMHP20718 246 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 SSTR5P35346 364 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 BLCAPP62952 87 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 MADCAM1Q13477 382 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 MED22Q15528 200 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 PDLIM3Q53GG5 364 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 AWAT2Q6E213 333 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 SGCDQ92629 289 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 RBM14Q96PK6 669 aaKnown RBP11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 DERL3Q96Q80 235 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 WNT10AQ9GZT5 417 aa11.06□□□□□ -0.64
SPTLC1-207ENST00000488921 OPN1MWP04001 364 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 MAS1P04201 325 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM106CPP0CH98 169 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 OPN1MW2P0DN77 364 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 OPN1MW3P0DN78 364 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 CD24P25063 80 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 RAB7AP51149 207 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 EMX1Q04741 257 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 SPHARQ15513 63 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 LTC4SQ16873 150 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 GLIPR1L1Q6UWM5 242 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 SPARTQ8N0X7 666 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 OR8H3Q8N146 312 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 OR10X1Q8NGY0 326 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 FCGR1BQ92637 280 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 MUL1Q969V5 352 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 OR5M11Q96RB7 305 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 PSG11Q9UQ72 335 aa11.05□□□□□ -0.64
SPTLC1-207ENST00000488921 A0A1W2PP11 408 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 A0A1W2PPK0 400 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A10PA6NDY2 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A18PA6NE21 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A16PA6NEW6 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A20PA6NIJ5 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A7PA6NKC0 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A12PA8MX19 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A5PA8MXJ8 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A23PA8MXZ1 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 MCRIP1C9JLW8 97 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 AIPO00170 330 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 PLXNB1O43157 2135 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A15PP0C7V4 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A13PP0C7W8 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A14PP0C7W9 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 FAM90A24PP0C7X0 464 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 HSMCR30P0CW71 290 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 CD28P10747 220 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 MAP2K4P45985 399 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 GNG10P50151 68 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 IRF3Q14653 427 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 TBCEQ15813 527 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 NSUN5P1Q3KNT7 163 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 TMEM30BQ3MIR4 351 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 ZNF497Q6ZNH5 498 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 THNSL2Q86YJ6 484 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 MS4A15Q8N5U1 240 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 OR4F17Q8NGA8 305 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 OR52M1Q8NGK5 317 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 RFESDQ8TAC1 157 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 WIPF2Q8TF74 440 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 OR4F4Q96R69 305 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 OCSTAMPQ9BR26 566 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 UQCC2Q9BRT2 126 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 RCC2Q9P258 522 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 GHRLQ9UBU3 117 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 MOB4Q9Y3A3 225 aa11.04□□□□□ -0.64
SPTLC1-207ENST00000488921 ORC5O43913 435 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 CA11O75493 328 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 TMEM95Q3KNT9 176 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 Q3ZCU0 254 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 ABCA11PQ4W5N1 156 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 C6orf183Q5T699 404 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 TRAT1Q6PIZ9 186 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 Q6ZS46 218 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 ZNF367Q7RTV3 350 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 OR56B4Q8NH76 319 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 LEAP2Q969E1 77 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 ARL11Q969Q4 196 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 CITED2Q99967 270 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 CST11Q9H112 138 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 ACOT13Q9NPJ3 140 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 ZNF581Q9P0T4 197 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
SPTLC1-207ENST00000488921 TRAV39A0A0B4J263 110 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 A0A1W2PPI3 338 aa11.02□□□□□ -0.65
SPTLC1-207ENST00000488921 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms