RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 OR2B8PP59922 312 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 PKIAP61925 76 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 ARF6P62330 175 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 RPL31P62899 125 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 RPS21P63220 83 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 ZNF92Q03936 586 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 PRKCDQ05655 676 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 BIKQ13323 160 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 BSXQ3C1V8 233 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 TTLL9Q3SXZ7 439 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 COX19Q49B96 90 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 TMEM255AQ5JRV8 349 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 RBM48Q5RL73 367 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 VAX1Q5SQQ9 334 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 TIMM23BQ5SRD1 257 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 SDHAF4Q5VUM1 108 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 ANKRD22Q5VYY1 191 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 ZNF773Q6PK81 442 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 OAFQ86UD1 273 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 ZNF695Q8IW36 515 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 C8orf59Q8N0T1 100 aaPredicted RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 PGAM4Q8N0Y7 254 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 TMEM251Q8N6I4 163 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 YIPF7Q8N8F6 280 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 LFNGQ8NES3 379 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 BPIFB6Q8NFQ5 453 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 DYNC2LI1Q8TCX1 351 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 RNF133Q8WVZ7 376 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 CDS1Q92903 461 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 CMTM5Q96DZ9 223 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 WDR34Q96EX3 536 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 WFIKKN1Q96NZ8 548 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 COL21A1Q96P44 957 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 SCGB3A2Q96PL1 93 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 TEAD3Q99594 435 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 EBNA1BP2Q99848 306 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 PRRT1Q99946 306 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 APOL4Q9BPW4 351 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 CCDC32Q9BV29 185 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 SCRT1Q9BWW7 348 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 RSPO3Q9BXY4 272 aaPredicted RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 NXF2Q9GZY0 626 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 PORCNQ9H237 461 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 DSN1Q9H410 356 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 TRABDQ9H4I3 376 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 C6orf50Q9HD87 102 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 FAM49BQ9NUQ9 324 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 TAS2R9Q9NYW1 312 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 MED11Q9P086 117 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 CD84Q9UIB8 345 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 RWDD2AQ9UIY3 292 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 NDRG2Q9UN36 371 aaKnown RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 TFR2Q9UP52 801 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 POMPQ9Y244 141 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 SLIT3O75094 1523 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 ZNF142P52746 1687 aaPredicted RBP2.31□□□□□ -2.04
SSR1-209ENST00000488834 CUL7Q14999 1698 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 FMN2Q9NZ56 1722 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 LAMB1P07942 1786 aa2.31□□□□□ -2.04
SSR1-209ENST00000488834 ZFC3H1O60293 1989 aaKnown RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 ZNF816-ZNF321PA0A0X1KG74 233 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 PNMA8CA0A1B0GUJ8 204 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 A0A1B0GVI7 797 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 ANKRD20A5PA0PJZ0 165 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 F6UB75 175 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 SMKR1H3BMG3 65 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 K7EP13 123 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 M0QZ92 97 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 DFFAO00273 331 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 ARPC5O15511 151 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 GABARAPO95166 117 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 PPBPP02775 128 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 ARG1P05089 322 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 MRPL3P09001 348 aaKnown RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 NBEAP1P0C6P0 100 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 CT45A6P0DMU7 189 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 CT45A5P0DMU8 189 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 CT45A7P0DMV0 189 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 LIPCP11150 499 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 HIST1H1BP16401 226 aaKnown RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 DTYMKP23919 212 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 DDTP30046 118 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 S100A11P31949 105 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 MAS1LP35410 378 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 IDH3GP51553 393 aaPredicted RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 HCCSP53701 268 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 RAP1AP62834 184 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 DCDP81605 110 aaKnown RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 SLC25A11Q02978 314 aaKnown RBP2.3□□□□□ -2.04
SSR1-209ENST00000488834 RAB31Q13636 194 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 CLINT1Q14677 625 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 TRAM1Q15629 374 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 IMPG1Q17R60 797 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 TMEM249Q2WGJ8 235 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 SLC36A2Q495M3 483 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 CT45A1Q5HYN5 189 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 AVPI1Q5T686 147 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 C9orf64Q5T6V5 341 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
SSR1-209ENST00000488834 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms