RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CITED4Q96RK1 184 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 MFFQ9GZY8 342 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 ARL6Q9H0F7 186 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 OR51I2Q9H344 312 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 C5orf66Q9H5L9 145 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 C1orf123Q9NWV4 160 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 SLC7A11Q9UPY5 501 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 A6NLC8 198 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 HTR3BO95264 441 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 CSTBP04080 98 aaKnown RBP16.22■□□□□ 0.19
CCM2-216ENST00000488727 AKR1C4P17516 323 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 OVCH2Q7RTZ1 564 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 TMEM230Q96A57 120 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 POM121Q96HA1 1249 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 Q96MF0 132 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 ST6GALNAC5Q9BVH7 336 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 PPA2Q9H2U2 334 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 COMMD9Q9P000 198 aa16.22■□□□□ 0.19
CCM2-216ENST00000488727 ZNF230Q9UIE0 474 aaPredicted RBP16.22■□□□□ 0.19
CCM2-216ENST00000488727 LRP5LA4QPB2 252 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 CDIPTO14735 213 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 SFT2D2O95562 160 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 CYB5R3P00387 301 aaPredicted RBP16.21■□□□□ 0.19
CCM2-216ENST00000488727 VAMP1P23763 118 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 GABRR1P24046 479 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 ECI1P42126 302 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 ZNF345Q14585 488 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 AADACL3Q5VUY0 350 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 SIGIRRQ6IA17 410 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 C11orf87Q6NUJ2 197 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 WDR82Q6UXN9 313 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 GSG1LQ6UXU4 331 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 PDCD10Q9BUL8 212 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 BPESC1Q9GZL8 116 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 PLEKHJ1Q9NW61 149 aa16.21■□□□□ 0.19
CCM2-216ENST00000488727 ITPR3Q14573 2671 aa16.21■□□□□ 0.18
CCM2-216ENST00000488727 A0A0D9SG52 128 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 VWC2LB2RUY7 222 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 SPRY1O43609 319 aaPredicted RBP16.2■□□□□ 0.18
CCM2-216ENST00000488727 ANGPTL7O43827 346 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 DTYMKP23919 212 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 DSCR9P59020 149 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 THOC7Q6I9Y2 204 aaKnown RBP16.2■□□□□ 0.18
CCM2-216ENST00000488727 C6orf201Q7Z4U5 140 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 CALHM1Q8IU99 346 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 PCDHB16Q9NRJ7 776 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 EHFQ9NZC4 300 aa16.2■□□□□ 0.18
CCM2-216ENST00000488727 TMEM178BH3BS89 294 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 NDUFS8O00217 210 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 CCSO14618 274 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 RHBDL1O75783 438 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 CHATP28329 748 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 HAAOP46952 286 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 NPY4RP50391 375 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 TMEM33P57088 247 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 PDZK1IP1Q13113 114 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 CHRFAM7AQ494W8 412 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 FAM201AQ5SY85 155 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 HAGHLQ6PII5 290 aaPredicted RBP16.19■□□□□ 0.18
CCM2-216ENST00000488727 ZNF546Q86UE3 836 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 SLC51BQ86UW2 128 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 ZSCAN4Q8NAM6 433 aaPredicted RBP16.19■□□□□ 0.18
CCM2-216ENST00000488727 ANGPTL6Q8NI99 470 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 SCARB1Q8WTV0 552 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 CASTOR1Q8WTX7 329 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 TNFSF18Q9UNG2 199 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 IGKV1-12A0A0C4DH73 117 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 hCG_1807616A0A1W2PRN6 198 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 C3orf80F5H4A9 247 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 PPIHO43447 177 aaKnown RBP16.19■□□□□ 0.18
CCM2-216ENST00000488727 IGKV1D-12P01611 117 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 ZNF573Q86YE8 665 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 KCNRGQ8N5I3 272 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 GCSAMQ8N6F7 178 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 OR11L1Q8NGX0 322 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 RTBDNQ9BSG5 229 aaPredicted RBP16.19■□□□□ 0.18
CCM2-216ENST00000488727 PIMREGQ9BSJ6 248 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 RNF7Q9UBF6 113 aa16.19■□□□□ 0.18
CCM2-216ENST00000488727 CELSR1Q9NYQ6 3014 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 IFNL4K9M1U5 179 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 SYNGR1O43759 233 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 OR2F2O95006 317 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 ZNF205O95201 554 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 RRASP10301 218 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 EGR1P18146 543 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 GPR6P46095 362 aaPredicted RBP16.18■□□□□ 0.18
CCM2-216ENST00000488727 OR2F1Q13607 317 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 NKAPLQ5M9Q1 402 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 AVPI1Q5T686 147 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 OSR2Q8N2R0 312 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 LRRC29Q8WV35 223 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 PPP1R1CQ8WVI7 109 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 NMES1Q9C002 83 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 MED9Q9NWA0 146 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 WIPI2Q9Y4P8 454 aa16.18■□□□□ 0.18
CCM2-216ENST00000488727 ZNF469Q96JG9 3925 aaPredicted RBP16.17■□□□□ 0.18
CCM2-216ENST00000488727 LRRC30A6NM36 301 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 J3QT63 122 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 WNT9BO14905 357 aa16.17■□□□□ 0.18
CCM2-216ENST00000488727 LHBP01229 141 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms