RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 TRAPPC2LH3BP13 241 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 J3QT63 122 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 NFYBP25208 207 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 NPBWR1P48145 328 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 MST1LQ2TV78 715 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 AKIRIN2Q53H80 203 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 Q6ZPA2 131 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 BAP18Q8IXM2 172 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 RTL8AQ9BWD3 113 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 ELOVL5Q9NYP7 299 aa10.31□□□□□ -0.76
HDAC6-230ENST00000488543 FLNCQ14315 2725 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 FAM221AA4D161 298 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 F8W036 122 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 RHBDL1O75783 438 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 THBDP07204 575 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 FCGR3AP08637 254 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 FUT3P21217 361 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 KITLGP21583 273 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 TUBG1P23258 451 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 DTYMKP23919 212 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 BLOC1S1P78537 153 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 C3orf36Q3SXR2 165 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 RPL7L1Q6DKI1 246 aaKnown RBP10.3□□□□□ -0.76
HDAC6-230ENST00000488543 LHFPL1Q86WI0 220 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 ARRDC1Q8N5I2 433 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 CMSS1Q9BQ75 279 aaKnown RBP10.3□□□□□ -0.76
HDAC6-230ENST00000488543 BCL2L14Q9BZR8 327 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 TUBG2Q9NRH3 451 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 RCC2Q9P258 522 aaKnown RBP10.3□□□□□ -0.76
HDAC6-230ENST00000488543 ZMAT5Q9UDW3 170 aaKnown RBP10.3□□□□□ -0.76
HDAC6-230ENST00000488543 LRBAP50851 2863 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 A0A1B0GW55 424 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 MLNRO43193 412 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 FGF16O43320 207 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 FBXO24O75426 580 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 OR7C1O76099 320 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-230ENST00000488543 DUX4L2P0CJ85 424 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 DUX4L3P0CJ86 424 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 DUX4L4P0CJ87 422 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 DUX4L5P0CJ88 424 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 DUX4L6P0CJ89 424 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 DUX4L7P0CJ90 424 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 TPT1P13693 172 aaKnown RBP10.3□□□□□ -0.76
HDAC6-230ENST00000488543 PMELP40967 661 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 TAS2R46P59540 309 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 MSMPQ1L6U9 139 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 WFIKKN1Q96NZ8 548 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 DUX4Q9UBX2 424 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 PLCE1Q9P212 2302 aa10.3□□□□□ -0.76
HDAC6-230ENST00000488543 LRP5LA4QPB2 252 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 CEACAM18A8MTB9 384 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 RPS2P15880 293 aaKnown RBP10.29□□□□□ -0.76
HDAC6-230ENST00000488543 CHRNB4P30926 498 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 FABP6P51161 128 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 MBNL2Q5VZF2 373 aaKnown RBP10.29□□□□□ -0.76
HDAC6-230ENST00000488543 FAHD2BQ6P2I3 314 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-230ENST00000488543 ETV3LQ6ZN32 361 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 Q6ZR03 302 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 WFDC8Q8IUA0 241 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 SCCPDHQ8NBX0 429 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 OR8G5Q8NG78 346 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 PHYHIPLQ96FC7 376 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 FAHD2AQ96GK7 314 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 NMES1Q9C002 83 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 DNTTIP1Q9H147 329 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 LIME1Q9H400 295 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 ZNF462Q96JM2 2506 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 FAM157CP0CG43 387 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 PRKACAP17612 351 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 TAS2R31P59538 309 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 OR8G1Q15617 311 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 MPV17LQ2QL34 196 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 SP6Q3SY56 376 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 BSCL2Q96G97 398 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-230ENST00000488543 EDARQ9UNE0 448 aa10.29□□□□□ -0.76
HDAC6-230ENST00000488543 A0A1B0GWJ7 208 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 PRSS44E7EML9 344 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 FPR2P25090 351 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 AKR1C3P42330 323 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 RPL35P42766 123 aaKnown RBP10.28□□□□□ -0.76
HDAC6-230ENST00000488543 LPAR6P43657 344 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 ZNF154Q13106 437 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 ZNF718Q3SXZ3 478 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 CHRFAM7AQ494W8 412 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 C5orf24Q7Z6I8 188 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 ZFP82Q8N141 532 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 TMEM100Q9NV29 134 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 ANXA10Q9UJ72 324 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 ERRFI1Q9UJM3 462 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-230ENST00000488543 SPTAN1Q13813 2472 aaKnown RBP10.28□□□□□ -0.76
HDAC6-230ENST00000488543 IGHV3-64DA0A0J9YX35 117 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 MUC1P15941 1255 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-230ENST00000488543 DUSP1P28562 367 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 ERVK11-1P61568 191 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 VHLLQ6RSH7 139 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 FAM58AQ8N1B3 248 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 POC1AQ8NBT0 407 aa10.28□□□□□ -0.76
HDAC6-230ENST00000488543 STOML3Q8TAV4 291 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms