RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ABHD5Q8WTS1 349 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 LRGUKQ96M69 825 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 MS4A10Q96PG2 267 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 CNN2Q99439 309 aaKnown RBP7.07□□□□□ -1.28
COL17A1-207ENST00000488320 FEVQ99581 238 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 ZNF251Q9BRH9 671 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 NCOR1P1Q9H4R4 102 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 LINC00574Q9H8X3 128 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 ETAA1Q9NY74 926 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 A3GALT2U3KPV4 340 aa7.07□□□□□ -1.28
COL17A1-207ENST00000488320 IGHV7-81A0A0B4J1V7 117 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 IGKV1-12A0A0C4DH73 117 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 SDCBPO00560 298 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-207ENST00000488320 TXNL1O43396 289 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 TPPPO94811 219 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 KDM4BO94953 1096 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 IGKV1D-12P01611 117 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 ZNF20P17024 532 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 BLVRBP30043 206 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-207ENST00000488320 TPPP2P59282 170 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 CD81P60033 236 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 LCN12Q6JVE5 192 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 LIN54Q6MZP7 749 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 FAHD1Q6P587 224 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 CEMP1Q6PRD7 247 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-207ENST00000488320 LINC00322Q6ZN03 302 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-207ENST00000488320 HDXQ7Z353 690 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 SLC35F2Q8IXU6 374 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 LINC00311Q8N616 119 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 GIPC3Q8TF64 312 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 ARL11Q969Q4 196 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 C10orf35Q96D05 121 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 CMTM5Q96DZ9 223 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 OPALINQ96PE5 141 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 SPACA5Q96QH8 159 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 CST11Q9H112 138 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 RHOFQ9HBH0 211 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 RANGRFQ9HD47 186 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-207ENST00000488320 TVP23BQ9NYZ1 205 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-207ENST00000488320 FOXA2Q9Y261 457 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-207ENST00000488320 MYRFQ9Y2G1 1151 aa7.06□□□□□ -1.28
COL17A1-207ENST00000488320 IGHV3-43A0A0B4J1X8 118 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 IGKV1-9A0A0C4DH69 117 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 CCDC182A6NF36 153 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 HMGB1P1B2RPK0 211 aaPredicted RBP7.05□□□□□ -1.28
COL17A1-207ENST00000488320 HLA-DRB1P01911 266 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 KRT8P05787 483 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 IGHV3-43DP0DP04 118 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 TMEM225BP0DP42 221 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 HSD17B1P14061 328 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 GZMHP20718 246 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 ZP3P21754 424 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 CDK5Q00535 292 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 TMEM267Q0VDI3 215 aaPredicted RBP7.05□□□□□ -1.28
COL17A1-207ENST00000488320 CDK5R1Q15078 307 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 TATDN3Q17R31 274 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 TMEM236Q5W0B7 351 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 OR2T5Q6IEZ7 315 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 CGB2Q6NT52 195 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 CYP2R1Q6VVX0 501 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 TMEM179BQ7Z7N9 219 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 Q8N402 240 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 DEFB125Q8N687 156 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 OR2T29Q8NH02 315 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 UBALD1Q8TB05 177 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 FGGYQ96C11 551 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 RHOVQ96L33 236 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 NEURL2Q9BR09 285 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 ANKRD60Q9BZ19 345 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 ZNF556Q9HAH1 456 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 SLC2A8Q9NY64 477 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 FAM53CQ9NYF3 392 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 SIGLEC8Q9NYZ4 499 aa7.05□□□□□ -1.28
COL17A1-207ENST00000488320 ANKRD34BA5PLL1 514 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 MAGEB3O15480 346 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 SOX15O60248 233 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 APOL3O95236 402 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 OSMP13725 252 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 ACTBP60709 375 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 ACTBL2Q562R1 376 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 RSBN1Q5VWQ0 802 aaPredicted RBP7.04□□□□□ -1.28
COL17A1-207ENST00000488320 LGALS9CQ6DKI2 356 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 PYHIN1Q6K0P9 492 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 SLC25A48Q6ZT89 311 aaKnown RBP7.04□□□□□ -1.28
COL17A1-207ENST00000488320 SAXO1Q8IYX7 474 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 TCTEX1D1Q8N7M0 179 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 OR52M1Q8NGK5 317 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 CNIH3Q8TBE1 160 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 PLPPR1Q8TBJ4 325 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 CCDC107Q8WV48 283 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 SPSB1Q96BD6 273 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 ADAT3Q96EY9 351 aaPredicted RBP7.04□□□□□ -1.28
COL17A1-207ENST00000488320 TBX5Q99593 518 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 SRD5A3Q9H8P0 318 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 ZNF355PQ9NSJ1 428 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 CLN6Q9NWW5 311 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 GFOD1Q9NXC2 390 aa7.04□□□□□ -1.28
COL17A1-207ENST00000488320 RNF150Q9ULK6 438 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms