RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 AQP10Q96PS8 301 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 DEPPQ9NTK1 212 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 UBE2L5PA0A1B0GUS4 154 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 DEFB108AA8MXU0 73 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 SYNGR2O43760 224 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 DEDDO75618 318 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 MT-ND4LP03901 98 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 TNFRSF1AP19438 455 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 S100A12P80511 92 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 Q3ZCU0 254 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 POM121Q96HA1 1249 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 ACTR3CQ9C0K3 210 aaPredicted RBP10.19□□□□□ -0.78
TRA2B-214ENST00000487615 CACFD1Q9UGQ2 172 aa10.19□□□□□ -0.78
TRA2B-214ENST00000487615 COL4A3Q01955 1670 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 MED19A0JLT2 244 aaPredicted RBP10.18□□□□□ -0.78
TRA2B-214ENST00000487615 ZNF716A6NP11 495 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 LDLRAD4O15165 306 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 GAPDHP04406 335 aaKnown RBP10.18□□□□□ -0.78
TRA2B-214ENST00000487615 ZFP82Q8N141 532 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 LYZL4Q96KX0 146 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 IGHV3-43A0A0B4J1X8 118 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 OOEPA6NGQ2 149 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 SEC11BP0C7V7 166 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 ZNF735P0CB33 412 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 IGHV3-43DP0DP04 118 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 ZNF708P17019 499 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 UCP2P55851 309 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 H3F3AP84243 136 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 FRZBQ92765 325 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 PKIBQ9C010 78 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 MS4A7Q9GZW8 240 aaPredicted RBP10.18□□□□□ -0.78
TRA2B-214ENST00000487615 RNF122Q9H9V4 155 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 MSL2Q9HCI7 577 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 DNAH12Q6ZR08 3092 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 MFSD2BA6NFX1 497 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 ZNF727A8MUV8 499 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 ENSAO43768 121 aaKnown RBP10.18□□□□□ -0.78
TRA2B-214ENST00000487615 RCC1P18754 421 aaPredicted RBP10.18□□□□□ -0.78
TRA2B-214ENST00000487615 IL3RAP26951 378 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 DYNLT3P51808 116 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 ZIC4Q8N9L1 334 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 TMEM222Q9H0R3 208 aa10.18□□□□□ -0.78
TRA2B-214ENST00000487615 FOXD3Q9UJU5 478 aaPredicted RBP10.18□□□□□ -0.78
TRA2B-214ENST00000487615 TXNL1O43396 289 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 AKR1C3P42330 323 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 SLC38A11Q08AI6 406 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 RTL8BQ17RB0 113 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 KCNIP4Q6PIL6 250 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 C2CD4CQ8TF44 421 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 SLC35B3Q9H1N7 401 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 ICE1Q9Y2F5 2266 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 LRRC3CA6NJW4 275 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 F2RP25116 425 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 ACOT6Q3I5F7 207 aaPredicted RBP10.17□□□□□ -0.78
TRA2B-214ENST00000487615 HPSE2Q8WWQ2 592 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 MRGPRFQ96AM1 343 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 GUCD1Q96NT3 240 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 C1QTNF5Q9BXJ0 243 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 PARP11Q9NR21 331 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 WISP1O95388 367 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 FOXC1Q12948 553 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 MED9Q9NWA0 146 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 WSB1Q9Y6I7 421 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 FCGR3BO75015 233 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 MBPP02686 304 aaPredicted RBP10.17□□□□□ -0.78
TRA2B-214ENST00000487615 FGF7P21781 194 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 TMEM108Q6UXF1 575 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 FAM89BQ8N5H3 189 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 SEC11CQ9BY50 192 aa10.17□□□□□ -0.78
TRA2B-214ENST00000487615 A0A1B0GU03 582 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 PRR33A8MZF0 331 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 C3orf80F5H4A9 247 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 CALHM1Q8IU99 346 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 POC1AQ8NBT0 407 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 UCP3P55916 312 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 TNFAIP6P98066 277 aaPredicted RBP10.16□□□□□ -0.78
TRA2B-214ENST00000487615 LY6G6FQ5SQ64 297 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 NABP1Q96AH0 204 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 GP6Q9HCN6 339 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 DLL3Q9NYJ7 618 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 hCG_1809904A0A1W2PP81 198 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 A0A1W2PPE2 198 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 A0A1W2PR64 198 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 A0A1W2PRV1 198 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 ETV2O00321 342 aaPredicted RBP10.16□□□□□ -0.78
TRA2B-214ENST00000487615 PSG2P11465 335 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 HOXB1P14653 301 aaPredicted RBP10.16□□□□□ -0.78
TRA2B-214ENST00000487615 SULT1A2P50226 295 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 LHX2P50458 406 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 NHLH2Q02577 135 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 P2RY6Q15077 328 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 ATP5SQ99766 215 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 REPIN1Q9BWE0 567 aaKnown RBP10.16□□□□□ -0.78
TRA2B-214ENST00000487615 ZNF552Q9H707 407 aaPredicted RBP10.16□□□□□ -0.78
TRA2B-214ENST00000487615 Q9N2K0 584 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 IL36GQ9NZH8 169 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 OR6C3Q9NZP0 311 aa10.16□□□□□ -0.78
TRA2B-214ENST00000487615 TRAV14DV4A0A0A6YYC5 116 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms