RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TMEM249Q2WGJ8 235 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 RNASE12Q5GAN4 147 aaKnown RBP10.52□□□□□ -0.73
HDAC6-229ENST00000486665 SPANXN2Q5MJ10 180 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 CD276Q5ZPR3 534 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 BAIAP2L2Q6UXY1 529 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 TRAPPC6BQ86SZ2 158 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 OR52I2Q8NH67 350 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 C8orf46Q8TAG6 207 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 SETD6Q8TBK2 473 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 MRGPRDQ8TDS7 321 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 GPX8Q8TED1 209 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 CORO2AQ92828 525 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 DACT3Q96B18 629 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-229ENST00000486665 RIMS4Q9H426 269 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-229ENST00000486665 TRAPPC2LQ9UL33 140 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 POLR3KQ9Y2Y1 108 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-229ENST00000486665 IGKV1D-8A0A087WSZ0 117 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 PPIAL4CA0A0B4J2A2 164 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 KIR2DS1A0A191URI9 304 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 hADV38S2A0JD32 116 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 FCER2P06734 321 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 FCGR3AP08637 254 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 PPIAL4GP0DN37 164 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 CCL3L1P16619 93 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 DLX6P56179 175 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 DGCR2P98153 550 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 PITPNAQ00169 270 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 LSAMPQ13449 338 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 C17orf58Q2M2W7 97 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 C11orf91Q3C1V1 193 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 PYDC2Q56P42 97 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 GVQW1Q8N7I0 195 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 LINC01356Q8N9X3 169 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 UBALD1Q8TB05 177 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 MSI2Q96DH6 328 aaKnown RBP10.51□□□□□ -0.73
HDAC6-229ENST00000486665 OCSTAMPQ9BR26 566 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 ST6GALNAC5Q9BVH7 336 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 Q9N2K0 584 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 C12orf4Q9NQ89 552 aa10.51□□□□□ -0.73
HDAC6-229ENST00000486665 MBNL3Q9NUK0 354 aaKnown RBP10.51□□□□□ -0.73
HDAC6-229ENST00000486665 TRGV10A0A0A0MS01 117 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 IGHV2-70DA0A0C4DH43 119 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 A0A1W2PQ09 198 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 B4DSR2 109 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 C12orf77C9JDV5 145 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 SULT1C2O00338 296 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 CTDSPLO15194 276 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 MSMBP08118 114 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 DTYMKP23919 212 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 PTBP1P26599 531 aaKnown RBP eCLIP10.5□□□□□ -0.731e-16■■■■■ 43.3
HDAC6-229ENST00000486665 GLP1RP43220 463 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 ARF6P62330 175 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 MRPS15P82914 257 aaKnown RBP10.5□□□□□ -0.73
HDAC6-229ENST00000486665 C11orf42Q8N5U0 333 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF565Q8N9K5 539 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 RFESDQ8TAC1 157 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 C15orf40Q8WUR7 153 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 SDHCQ99643 169 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-229ENST00000486665 SRRQ9GZT4 340 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 SCPEP1Q9HB40 452 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 OR6C3Q9NZP0 311 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 RABL2AQ9UBK7 228 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-229ENST00000486665 RABL2BQ9UNT1 228 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 UBE2J1Q9Y385 318 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-229ENST00000486665 LINC00312Q9Y6C7 94 aa10.5□□□□□ -0.73
HDAC6-229ENST00000486665 ARHGAP32A7KAX9 2087 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 C15orf65H3BRN8 121 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 GABARAPH6UMI1 98 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 GSTZ1O43708 216 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-229ENST00000486665 LANCL1O43813 399 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 MMP23AO75900 390 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 LPLP06858 475 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 SCTP09683 121 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 GSTT2P0CG29 244 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 GSTT2BP0CG30 244 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF728P0DKX0 622 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 GZMHP20718 246 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 SSTR5P35346 364 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 GDNFP39905 211 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 GZMKP49863 264 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 DVL1P1P54792 670 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF45Q02386 682 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 FAM53AQ6NSI3 398 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-229ENST00000486665 HOGA1Q86XE5 327 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 Q8N7P7 452 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 OR1L1Q8NH94 360 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 FCAMRQ8WWV6 532 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 ARL11Q969Q4 196 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 TAF9BQ9HBM6 251 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 CALYQ9NYX4 217 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 KLK11Q9UBX7 282 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 LPAR3Q9UBY5 353 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 ANAPC10Q9UM13 185 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 INSIG2Q9Y5U4 225 aa10.49□□□□□ -0.73
HDAC6-229ENST00000486665 KBTBD11-OT1A0A1B0GTJ5 212 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 POM121CA8CG34 1229 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 C17orf98A8MV24 154 aa10.48□□□□□ -0.73
HDAC6-229ENST00000486665 A8MV72 311 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-229ENST00000486665 TRDCB7Z8K6 153 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms