RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TRAV8-7A0A075B6U6 113 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 A0A096LPI6 279 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 A0A1B0GUS0 222 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 SLC22A23A1A5C7 686 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 CCDC160A6NGH7 325 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 DNAJC9-AS1A6NH13 148 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 CLDN24A6NM45 220 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 CLDN25C9JDP6 229 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 M0QZ24 198 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 TPST1O60507 370 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 CDC14BO60729 498 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 FSHBP01225 129 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 IGHV2-5P01817 119 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 THY1P04216 161 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 ALDOBP05062 364 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 METTL15P1P0C7V9 234 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF35P13682 527 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 HOXB9P17482 250 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 RPS19P39019 145 aaKnown RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 ATP4BP51164 291 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 CLDN17P56750 224 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 C1DQ13901 141 aaKnown RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 ICAM4Q14773 271 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 KPNB1Q14974 876 aaKnown RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 MAD2L1BPQ15013 274 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 TRAM1Q15629 374 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 CEACAM16Q2WEN9 425 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 AVPI1Q5T686 147 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 SYT6Q5T7P8 510 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 C1orf140Q5VVS0 124 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 TMEM200BQ69YZ2 307 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 TNFAIP8L2Q6P589 184 aaPredicted RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 CD200R1LQ6Q8B3 271 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 FRRS1Q6ZNA5 592 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 TMPRSS11FQ6ZWK6 438 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 C4orf33Q8N1A6 199 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 PRSS35Q8N3Z0 413 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 FGFRL1Q8N441 504 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 KRTCAP2Q8N6L1 136 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 NOXO1Q8NFA2 376 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 OR9Q2Q8NGE9 314 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 POP5Q969H6 163 aaKnown RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 LRRC58Q96CX6 371 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 ITCHQ96J02 903 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 ELOVL1Q9BW60 279 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 CADM1Q9BY67 442 aaKnown RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 MEGF9Q9H1U4 602 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 TMEM27Q9HBJ8 222 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 GNG12Q9UBI6 72 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 RPS6KB2Q9UBS0 482 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 TESQ9UGI8 421 aaKnown RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 PSORS1C1Q9UIG5 152 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 ANGPT4Q9Y264 503 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 LSM4Q9Y4Z0 139 aaKnown RBP5.66□□□□□ -1.5
HDAC3-209ENST00000486618 DSPPQ9NZW4 1301 aa5.66□□□□□ -1.5
HDAC3-209ENST00000486618 IGHV1-69-2A0A0G2JMI3 117 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 OR6C6A6NF89 314 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 EFCAB9A8MZ26 197 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 PRSS46E5RG02 174 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 F5H768 121 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 RNASET2O00584 256 aaKnown RBP5.65□□□□□ -1.5
HDAC3-209ENST00000486618 XPNPEP2O43895 674 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 FOXH1O75593 365 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 NCR1O76036 304 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 RAB36O95755 333 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 MT-CO2P00403 227 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 DBIP07108 87 aaKnown RBP5.65□□□□□ -1.5
HDAC3-209ENST00000486618 C8orf88P0DMB2 117 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 CD79AP11912 226 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF14P17017 642 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-209ENST00000486618 AKR1C4P17516 323 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 KITLGP21583 273 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 GCAP28676 217 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 S100A3P33764 101 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 CX3CR1P49238 355 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 UGT2B15P54855 530 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 IFITM2Q01629 132 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 PAX2Q02962 417 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF841Q6ZN19 808 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 RNF144BQ7Z419 303 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 HMGN2P46Q86SG4 172 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 HAPLN4Q86UW8 402 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 LRP11Q86VZ4 500 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 CLECL1Q8IZS7 167 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 MUC20Q8N307 709 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-209ENST00000486618 CADM2Q8N3J6 435 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 NANOGP1Q8N7R0 232 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 OR1M1Q8NGA1 313 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 OR5AN1Q8NGI8 311 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 OR1F12Q8NHA8 337 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 MFSD8Q8NHS3 518 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 CENPNQ96H22 339 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-209ENST00000486618 OXGR1Q96P68 337 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 GATA5Q9BWX5 397 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-209ENST00000486618 ARL6Q9H0F7 186 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 Q9N2K0 584 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 B3GAT2Q9NPZ5 323 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 HINT3Q9NQE9 182 aaKnown RBP5.65□□□□□ -1.5
HDAC3-209ENST00000486618 INPP5EQ9NRR6 644 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 B3GNT2Q9NY97 397 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms