RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ZFP57Q9NU63 452 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 TAAR3PQ9P1P4 343 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 TRAPPC2LQ9UL33 140 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 C1QTNF9BB2RNN3 333 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 M0R1B8 84 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 GLI4P10075 376 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 TDGF1P3P51864 188 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 UCNP55089 124 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 WDR82Q6UXN9 313 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 MEX3BQ6ZN04 569 aaKnown RBP17.2■□□□□ 0.34
HPS3-206ENST00000486530 FAM219AQ8IW50 185 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 RELL2Q8NC24 303 aaPredicted RBP17.2■□□□□ 0.34
HPS3-206ENST00000486530 ANGPTL6Q8NI99 470 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 RBPMSQ93062 196 aaKnown RBP17.2■□□□□ 0.34
HPS3-206ENST00000486530 MSL2Q9HCI7 577 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 SDHAF2Q9NX18 166 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 WIPI2Q9Y4P8 454 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 SPEF1Q9Y4P9 236 aa17.2■□□□□ 0.34
HPS3-206ENST00000486530 MFSD2BA6NFX1 497 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 LMO1P25800 156 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 S100GP29377 79 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 PRAMEF6Q5VXH4 476 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 TMEM268Q5VZI3 342 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 ACP7Q6ZNF0 438 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 ZNF826PQ6ZT77 177 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 SLC35G3Q8N808 338 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 TMEM56Q96MV1 263 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 REG4Q9BYZ8 158 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 CCL28Q9NRJ3 127 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 CYTL1Q9NRR1 136 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 MBNL3Q9NUK0 354 aaKnown RBP17.19■□□□□ 0.34
HPS3-206ENST00000486530 OR14J1Q9UGF5 321 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 UBE2J1Q9Y385 318 aaPredicted RBP17.19■□□□□ 0.34
HPS3-206ENST00000486530 TMEM56-RWDD3S4R434 201 aa17.19■□□□□ 0.34
HPS3-206ENST00000486530 PRRG2O14669 202 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 HSD17B6O14756 317 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 SCGB1D2O95969 90 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 CRYAAP02489 173 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 FAM74A1Q5RGS3 127 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 THOC7Q6I9Y2 204 aaKnown RBP17.18■□□□□ 0.34
HPS3-206ENST00000486530 LSM5Q9Y4Y9 91 aaKnown RBP17.18■□□□□ 0.34
HPS3-206ENST00000486530 BSNQ9UPA5 3926 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 DUXBA0A1W2PPF3 345 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 TAAR5O14804 337 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 FAM87AP0C7U9 286 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 C1QTNF9P0C862 333 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 HKR1P10072 659 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 BAP18Q8IXM2 172 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 PRR7Q8TB68 274 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 IL1F10Q8WWZ1 152 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 DMRTA2Q96SC8 542 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 PIGMQ9H3S5 423 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 SESN1Q9Y6P5 492 aa17.18■□□□□ 0.34
HPS3-206ENST00000486530 A8MXE2 369 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 K7EPK0 472 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 WNT9BO14905 357 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 CDS2O95674 445 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 MBPP02686 304 aaPredicted RBP17.17■□□□□ 0.34
HPS3-206ENST00000486530 ZNF250P15622 560 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 HMGN3Q15651 99 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 SMIM21Q3B7S5 101 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 ZNF695Q8IW36 515 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 FAM71E2Q8N5Q1 922 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 BVESQ8NE79 360 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 PLEKHA2Q9HB19 425 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 PTPRQQ9UMZ3 2332 aa17.17■□□□□ 0.34
HPS3-206ENST00000486530 TMEM30CPA0ZSE6 113 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 E5RGE8 158 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 H0Y980 276 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 UCP1P25874 307 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 RPL12P30050 165 aaKnown RBP17.16■□□□□ 0.34
HPS3-206ENST00000486530 GLRXP35754 106 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 OR10V1Q8NGI7 309 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 ZC4H2Q9NQZ6 224 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 UFSP2Q9NUQ7 469 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 NSG2Q9Y328 171 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 CHD3Q12873 2000 aaKnown RBP17.16■□□□□ 0.34
HPS3-206ENST00000486530 PSPNO60542 156 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 CD200P41217 278 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 CEBPDP49716 269 aaPredicted RBP17.16■□□□□ 0.34
HPS3-206ENST00000486530 EIF5AP63241 154 aaKnown RBP17.16■□□□□ 0.34
HPS3-206ENST00000486530 ALKBH2Q6NS38 261 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 CCDC28AQ8IWP9 274 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 SPIN2AQ99865 258 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 SPIN2BQ9BPZ2 258 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 USB1Q9BQ65 265 aaKnown RBP17.16■□□□□ 0.34
HPS3-206ENST00000486530 OR1A1Q9P1Q5 309 aa17.16■□□□□ 0.34
HPS3-206ENST00000486530 ERRFI1Q9UJM3 462 aaPredicted RBP17.16■□□□□ 0.34
HPS3-206ENST00000486530 ATMQ13315 3056 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 PIGBOS1A0A0B4J2F0 54 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.15■□□□□ 0.34
HPS3-206ENST00000486530 PGLYRP1O75594 196 aaPredicted RBP17.15■□□□□ 0.34
HPS3-206ENST00000486530 IGHV3-13P01766 116 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 BMP5P22003 454 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 NKX6-1P78426 367 aaPredicted RBP17.15■□□□□ 0.34
HPS3-206ENST00000486530 MSMPQ1L6U9 139 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 SLC35E4Q6ICL7 350 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 HSD17B13Q7Z5P4 300 aaPredicted RBP17.15■□□□□ 0.34
HPS3-206ENST00000486530 DOLPP1Q86YN1 238 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 SELENOHQ8IZQ5 122 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms