RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ETAA1Q9NY74 926 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 TRAPPC2LQ9UL33 140 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 AMMECR1Q9Y4X0 333 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-204ENST00000486023 DSCAML1Q8TD84 2053 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 A0A087X0M5 115 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 A0A1B0GX30 115 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 UBE2QL1A1L167 161 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 FAM90A22PA8MWA6 464 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 AIPO00170 330 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 SDCBPO00560 298 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-204ENST00000486023 CD28P10747 220 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 MGMTP16455 207 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 GZMHP20718 246 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 MYF6P23409 242 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 VDAC2P45880 294 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-204ENST00000486023 DEFA6Q01524 100 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 GPR50Q13585 617 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 HES1Q14469 280 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 HNF4GQ14541 408 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 FBLN7Q53RD9 439 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 IZUMO2Q6UXV1 221 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 TMEM104Q8NE00 496 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 OR4K15Q8NH41 348 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 UFD1Q92890 307 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 CNBD2Q96M20 576 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 SLC25A33Q9BSK2 321 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 NCOR1P1Q9H4R4 102 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 IFT22Q9H7X7 185 aa14.15□□□□□ -0.14
COL6A1-204ENST00000486023 NPIPB11E5RHQ5 1161 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 RGS10O43665 173 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 MPIG6BO95866 241 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 MT-ND4P03905 459 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 SLC35A2P78381 396 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 DIAPH2-AS1Q14236 149 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 ABCA11PQ4W5N1 156 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 NKAPLQ5M9Q1 402 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 SYT6Q5T7P8 510 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-204ENST00000486023 RNLSQ5VYX0 342 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 OR10K2Q6IF99 312 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 FAM53AQ6NSI3 398 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-204ENST00000486023 CCDC144NLQ6NUI1 221 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 CDH26Q8IXH8 852 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 NKAIN3Q8N8D7 197 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 OR56B4Q8NH76 319 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 THRSPQ92748 146 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 CYYR1Q96J86 154 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 AKR1E2Q96JD6 320 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 SPACA1Q9HBV2 294 aa14.14□□□□□ -0.15
COL6A1-204ENST00000486023 LSM2Q9Y333 95 aaKnown RBP14.14□□□□□ -0.15
COL6A1-204ENST00000486023 CMYA5Q8N3K9 4069 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 LY6LH3BQJ8 138 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 KCNAB3O43448 404 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 FBXO24O75426 580 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 LPLP06858 475 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 MAP2K4P45985 399 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 REG1BP48304 166 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 MADCAM1Q13477 382 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 HSD17B12Q53GQ0 312 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 GLT8D1Q68CQ7 371 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 UNQ9370/PRO34162Q6UXP9 181 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 ZNF497Q6ZNH5 498 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 DRAM1Q8N682 238 aa14.13□□□□□ -0.15
COL6A1-204ENST00000486023 MRPS24Q96EL2 167 aaKnown RBP14.13□□□□□ -0.15
COL6A1-204ENST00000486023 WIPF1O43516 503 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 FAM106CPP0CH98 169 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 SRMP19623 302 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 GP2P55259 537 aaKnown RBP14.12□□□□□ -0.15
COL6A1-204ENST00000486023 CENPVQ7Z7K6 275 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-204ENST00000486023 MOB3BQ86TA1 216 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 C1QL4Q86Z23 238 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 OR10A7Q8NGE5 316 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 OR10V1Q8NGI7 309 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 RBM14Q96PK6 669 aaKnown RBP14.12□□□□□ -0.15
COL6A1-204ENST00000486023 UQCC2Q9BRT2 126 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 ANKRD60Q9BZ19 345 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 CST11Q9H112 138 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 KCNK15Q9H427 330 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 LINC00574Q9H8X3 128 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 LIN7BQ9HAP6 207 aa14.12□□□□□ -0.15
COL6A1-204ENST00000486023 C15orf65H3BRN8 121 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 SNRNP70P08621 437 aaKnown RBP14.11□□□□□ -0.15
COL6A1-204ENST00000486023 FUT3P21217 361 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 RPS25P62851 125 aaKnown RBP14.11□□□□□ -0.15
COL6A1-204ENST00000486023 PAX5Q02548 391 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 IRF3Q14653 427 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 LRRTM1Q86UE6 522 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 LYPD6Q86Y78 171 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 Q8N2B8 174 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 CFHR4Q92496 578 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 DUSP21Q9H596 190 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 RCC2Q9P258 522 aaKnown RBP14.11□□□□□ -0.15
COL6A1-204ENST00000486023 GNG12Q9UBI6 72 aa14.11□□□□□ -0.15
COL6A1-204ENST00000486023 IGHV3-72A0A0B4J1Y9 119 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 A0A1W2PRX2 142 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 OOSP1A8MZH6 123 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 C12orf77C9JDV5 145 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 CCRL2O00421 344 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 SPINT2O43291 252 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 OR2F2O95006 317 aa14.1□□□□□ -0.15
COL6A1-204ENST00000486023 RCC1P18754 421 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms