RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 TMEM42Q69YG0 159 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 RWDD4Q6NW29 188 aaKnown RBP2.02□□□□□ -2.09
VPS41-213ENST00000485955 TRIM40Q6P9F5 258 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 TMEM179Q6ZVK1 233 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 GDPD3Q7L5L3 318 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 C6orf120Q7Z4R8 191 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 FAM19A5Q7Z5A7 132 aaPredicted RBP2.02□□□□□ -2.09
VPS41-213ENST00000485955 PIANPQ8IYJ0 282 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 BLIDQ8IZY5 108 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 OR6V1Q8N148 313 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 METTL13Q8N6R0 699 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 OR51D1Q8NGF3 324 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 OR10X1Q8NGY0 326 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 OR6K3Q8NGY3 331 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 RAB8BQ92930 207 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 BORCS5Q969J3 196 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 RERGQ96A58 199 aaPredicted RBP2.02□□□□□ -2.09
VPS41-213ENST00000485955 EEF1AKMT3Q96AZ1 226 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 TESCQ96BS2 214 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 RCN3Q96D15 328 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 CMTM7Q96FZ5 175 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 SCGB3A2Q96PL1 93 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 OR2V2Q96R30 315 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 VAT1Q99536 393 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 GPR21Q99679 349 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 GABRG3Q99928 467 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 DHRS9Q9BPW9 319 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 MRPL45Q9BRJ2 306 aaKnown RBP2.02□□□□□ -2.09
VPS41-213ENST00000485955 CDCA4Q9BXL8 241 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 ZNF385DQ9H6B1 395 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 REEP1Q9H902 201 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 UGT1A7Q9HAW7 530 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 ENOPH1Q9UHY7 261 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 ZNF391Q9UJN7 358 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 ING4Q9UNL4 249 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 FARSAQ9Y285 508 aaKnown RBP2.02□□□□□ -2.09
VPS41-213ENST00000485955 NDUFAF1Q9Y375 327 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 GOLT1BQ9Y3E0 138 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 RPL36Q9Y3U8 105 aaKnown RBP2.02□□□□□ -2.09
VPS41-213ENST00000485955 MGAMO43451 1857 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 SPENQ96T58 3664 aaKnown RBP2.02□□□□□ -2.09
VPS41-213ENST00000485955 CELSR1Q9NYQ6 3014 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 BOD1L1Q8NFC6 3051 aa2.02□□□□□ -2.09
VPS41-213ENST00000485955 TICRRQ7Z2Z1 1910 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 MYOM3Q5VTT5 1437 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ANKRD50Q9ULJ7 1429 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 RFX7Q2KHR2 1363 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 IGLV3-22A0A075B6J6 115 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 TINCRA0A1B0GVN0 87 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ISPDA4D126 451 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 VPS37CA5D8V6 355 aaPredicted RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 SMIM9A6NGZ8 99 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 A6NIZ1 184 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ZNF233A6NK53 670 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 EFCAB9A8MZ26 197 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 UBDO15205 165 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 NUPL2O15504 423 aaKnown RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 DPM1O60762 260 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ENTPD6O75354 484 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 DCTN3O75935 186 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 IGKV1-17P01599 117 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 CD8AP01732 235 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ZNF286BP0CG31 522 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ICAM2P13598 275 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 KCNE1P15382 129 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 TCP1P17987 556 aaKnown RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 RAB5AP20339 215 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 F8A1P23610 371 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 RPS12P25398 132 aaKnown RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 PSMA1P25786 263 aaKnown RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 CRABP1P29762 137 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 RPA3P35244 121 aaPredicted RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 ARL2P36404 184 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 CEACAM6P40199 344 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 KIR2DS4P43632 304 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ZNF121P58317 390 aaPredicted RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 RAB8AP61006 207 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 RAP1BP61224 184 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 SELENOTP62341 195 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 TFAMQ00059 246 aaKnown RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 FLI1Q01543 452 aaPredicted RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 ACVR1Q04771 509 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 NSUN5P1Q3KNT7 163 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 TTLL9Q3SXZ7 439 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ZBED5Q49AG3 693 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 VAX1Q5SQQ9 334 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 HBMQ6B0K9 141 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 EPGNQ6UW88 154 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 CASP12Q6UXS9 341 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 C12orf54Q6X4T0 127 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 TMEM144Q7Z5S9 345 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 DPPA2Q7Z7J5 298 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 HORMAD1Q86X24 394 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 PHF13Q86YI8 300 aaPredicted RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 ATPAF2Q8N5M1 289 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 RNF182Q8N6D2 247 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 C12orf29Q8N999 325 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 HSD17B11Q8NBQ5 300 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 TMEM35BQ8NCS4 154 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 NPBQ8NG41 125 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms