RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 C19orf24Q9BVV8 132 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 DCSTAMPQ9H295 470 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 RNF167Q9H6Y7 350 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 C12orf4Q9NQ89 552 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 RHBDL2Q9NX52 303 aa6.79□□□□□ -1.32
SF3A1-208ENST00000485618 CUBNO60494 3623 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 TRAV40A0A0B4J280 105 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 CENPVL3A0A0U1RRI6 287 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 SMIM30A4D0T7 59 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 BTBD17A6NE02 478 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 ZNF701M0R085 212 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-208ENST00000485618 NPFFO15130 113 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 LDLRAD4O15165 306 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 SOCS1O15524 211 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 TCF21O43680 179 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 FBP1P09467 338 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 CLEC2LP0C7M8 214 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 SNRPBP14678 240 aaKnown RBP6.78□□□□□ -1.32
SF3A1-208ENST00000485618 MMP9P14780 707 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 CCL3L1P16619 93 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 NFYBP25208 207 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 KIR2DS4P43632 304 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 NCS1P62166 190 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 KIR2DS1Q14954 304 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 PNLIPRP3Q17RR3 467 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 KIAA2026Q5HYC2 2103 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 UBE2NLQ5JXB2 153 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 STEAP3Q658P3 488 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 CCDC144NLQ6NUI1 221 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 BRICD5Q6PL45 260 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 C6orf201Q7Z4U5 140 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 FGFRL1Q8N441 504 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 TPRX1Q8N7U7 411 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 DTX3Q8N9I9 347 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 SETD6Q8TBK2 473 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 LGALS14Q8TCE9 139 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 MRGPRDQ8TDS7 321 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 CCDC107Q8WV48 283 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 TNFRSF14Q92956 283 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 GALMQ96C23 342 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 ARHGAP5-AS1Q96IT6 56 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 TBX15Q96SF7 602 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 CLEC7AQ9BXN2 247 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 TMEM133Q9H2Q1 129 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 DPAGT1Q9H3H5 408 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 LINC00574Q9H8X3 128 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 ZMAT3Q9HA38 289 aaKnown RBP6.78□□□□□ -1.32
SF3A1-208ENST00000485618 SIRT7Q9NRC8 400 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 CALYQ9NYX4 217 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 IDI2-AS1Q9NZ38 188 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 RABL2AQ9UBK7 228 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-208ENST00000485618 RABL2BQ9UNT1 228 aa6.78□□□□□ -1.32
SF3A1-208ENST00000485618 AMMECR1Q9Y4X0 333 aaPredicted RBP6.78□□□□□ -1.32
SF3A1-208ENST00000485618 TRBV6-6A0A0A6YYG2 114 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 MEIOCA2RUB1 952 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 SDCBPO00560 298 aaPredicted RBP6.77□□□□□ -1.33
SF3A1-208ENST00000485618 FCN3O75636 299 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 TPPPO94811 219 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 AVPP01185 164 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 APOA1P02647 267 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 ARG1P05089 322 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 CTXN2P0C2S0 81 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 HIST1H1DP16402 221 aaKnown RBP6.77□□□□□ -1.33
SF3A1-208ENST00000485618 IL3RAP26951 378 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 HTR1DP28221 377 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 CBX5P45973 191 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 GNG2P59768 71 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 SRSF2Q01130 221 aaKnown RBP6.77□□□□□ -1.33
SF3A1-208ENST00000485618 ZNF273Q14593 569 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 Q3ZCU0 254 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 CDNFQ49AH0 187 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 TMEM69Q5SWH9 247 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 MINOS1Q5TGZ0 78 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 HACD4Q5VWC8 232 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 SIGIRRQ6IA17 410 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 C1orf229Q6ZS94 237 aaPredicted RBP6.77□□□□□ -1.33
SF3A1-208ENST00000485618 IL17RELQ6ZVW7 336 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 NR2C2APQ86WQ0 139 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 GAPTQ8N292 157 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 ABHD12Q8N2K0 398 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 PNKDQ8N490 385 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 Q8N7P7 452 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 SAMD12Q8N8I0 201 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 OR11H6Q8NGC7 330 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 ISOC1Q96CN7 298 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 DGCR14Q96DF8 476 aaKnown RBP6.77□□□□□ -1.33
SF3A1-208ENST00000485618 MALSU1Q96EH3 234 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 SULT4A1Q9BR01 284 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 NICN1Q9BSH3 213 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 PECRQ9BY49 303 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 ABCG5Q9H222 651 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 TAF9BQ9HBM6 251 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 COMMD3Q9UBI1 195 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 GNG12Q9UBI6 72 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 RSL24D1Q9UHA3 163 aaKnown RBP6.77□□□□□ -1.33
SF3A1-208ENST00000485618 TBL2Q9Y4P3 447 aaKnown RBP6.77□□□□□ -1.33
SF3A1-208ENST00000485618 MINOS1-NBL1R4GNA1 71 aa6.77□□□□□ -1.33
SF3A1-208ENST00000485618 A0A075B6Q4 140 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 TRAV18A0A075B6X5 111 aa6.76□□□□□ -1.33
SF3A1-208ENST00000485618 A0A0B4J203 849 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms