RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 IRF3Q14653 427 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 C9orf152Q5JTZ5 239 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 Q6P435 159 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 C5orf56Q8N8D9 126 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 OR5D14Q8NGL3 314 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 COQ2Q96H96 371 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 FRRS1LQ9P0K9 344 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 DHDHQ9UQ10 334 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 GSTK1Q9Y2Q3 226 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 U3KQK5 164 aa10.28□□□□□ -0.76
HDAC6-227ENST00000485102 OR4C45A6NMZ5 311 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 C3orf84H3BNL1 204 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 MAGEB3O15480 346 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 GALP22466 123 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 KIR3DL2P43630 455 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 SLC35B1P78383 322 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 PAX5Q02548 391 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 EBI3Q14213 229 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 KRBOX4Q5JUW0 171 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 OR2G6Q5TZ20 316 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 SLC16A12Q6ZSM3 486 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 C8orf86Q6ZUL3 223 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 ZNF695Q8IW36 515 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 SERPINA12Q8IW75 414 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 RDH10Q8IZV5 341 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 OR8H3Q8N146 312 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 ZNF565Q8N9K5 539 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 TSPAN14Q8NG11 270 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 RPEQ96AT9 228 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 KIRREL1Q96J84 757 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 OPALINQ96PE5 141 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 ISG20L2Q9H9L3 353 aaKnown RBP10.27□□□□□ -0.77
HDAC6-227ENST00000485102 ACOT13Q9NPJ3 140 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 CLEC2DQ9UHP7 191 aa10.27□□□□□ -0.77
HDAC6-227ENST00000485102 AMMECR1Q9Y4X0 333 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-227ENST00000485102 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 NPIPB11E5RHQ5 1161 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 H3BSH0 61 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 J3QR06 171 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 SLC33A1O00400 549 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-227ENST00000485102 SNRNP70P08621 437 aaKnown RBP10.26□□□□□ -0.77
HDAC6-227ENST00000485102 CELP19835 753 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 RAB7AP51149 207 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 MADCAM1Q13477 382 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 TPBGQ13641 420 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 TIMM50Q3ZCQ8 353 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 UTF1Q5T230 341 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 UBE2UQ5VVX9 321 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 DMKNQ6E0U4 476 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-227ENST00000485102 C18orf65Q6ZTR6 163 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 RNF152Q8N8N0 203 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 ZNF485Q8NCK3 441 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 OR51T1Q8NGJ9 327 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 OR13C3Q8NGS6 347 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 TSEN15Q8WW01 171 aaKnown RBP10.26□□□□□ -0.77
HDAC6-227ENST00000485102 TOMM40LQ969M1 308 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 FGGYQ96C11 551 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 NOL4LQ96MY1 436 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-227ENST00000485102 MGLLQ99685 303 aa10.26□□□□□ -0.77
HDAC6-227ENST00000485102 FAM172BPA6NC97 362 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 MAGEA13PA6NCF6 341 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 SERPINE3A8MV23 424 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 CCL24O00175 119 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 ARL6IP5O75915 188 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 HSMCR30P0CW71 290 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 CALCBP10092 127 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 ZNF44P15621 663 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 CPEP16870 476 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 SNU13P55769 128 aaKnown RBP10.25□□□□□ -0.77
HDAC6-227ENST00000485102 PPP3R1P63098 170 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 RBM39Q14498 530 aaKnown RBP10.25□□□□□ -0.77
HDAC6-227ENST00000485102 Q499Y3 187 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 NKAPLQ5M9Q1 402 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 ELP2Q6IA86 826 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 TEX38Q6PEX7 206 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 FOXRED2Q8IWF2 684 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 SPARTQ8N0X7 666 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 STPG2Q8N412 459 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 DRAM1Q8N682 238 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 KLHL30-AS1Q8NEE0 82 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 OR10A7Q8NGE5 316 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 OR56B4Q8NH76 319 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 GHSRQ92847 366 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 RAX2Q96IS3 184 aa10.25□□□□□ -0.77
HDAC6-227ENST00000485102 PAK1IP1Q9NWT1 392 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-227ENST00000485102 NUDT19A8MXV4 375 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 CCRL2O00421 344 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 DEGS1O15121 323 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 TMEM11P17152 192 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 CDX1P47902 265 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-227ENST00000485102 PSMD7P51665 324 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 NANOS3P60323 173 aaKnown RBP10.24□□□□□ -0.77
HDAC6-227ENST00000485102 KIR2DS1Q14954 304 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 PNLIPRP3Q17RR3 467 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 SLC35E3Q7Z769 313 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 PARP16Q8N5Y8 322 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 GON7Q9BXV9 100 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 PSG11Q9UQ72 335 aa10.24□□□□□ -0.77
HDAC6-227ENST00000485102 LSM2Q9Y333 95 aaKnown RBP10.24□□□□□ -0.77
HDAC6-227ENST00000485102 HUWE1Q7Z6Z7 4374 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms