RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 IQCF1Q8N6M8 205 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 KIR3DL3Q8N743 410 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 OR52H1Q8NGJ2 320 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 OR9I1Q8NGQ6 314 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 OR6N1Q8NGY5 312 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 ZNF75AQ96N20 296 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 OR2M2Q96R28 347 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 DOK1Q99704 481 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 CCDC28BQ9BUN5 200 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 NAA50Q9GZZ1 169 aaKnown RBP5.3□□□□□ -1.56
CLK1-212ENST00000482590 PLEKHA1Q9HB21 404 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 BCL2L10Q9HD36 194 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 FGF20Q9NP95 211 aaPredicted RBP5.3□□□□□ -1.56
CLK1-212ENST00000482590 FBXL3Q9UKT7 428 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLK1-212ENST00000482590 OR2W1Q9Y3N9 320 aa5.3□□□□□ -1.56
CLK1-212ENST00000482590 ARHGAP32A7KAX9 2087 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 IGHV2-70DA0A0C4DH43 119 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 A0A1B0GWA3 101 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 ZNF726A6NNF4 738 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 LYNX1G3V0Z9 82 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 DCTN6O00399 190 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 XPNPEP2O43895 674 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 TNFAIP8O95379 198 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 LYNX1P0DP58 116 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 HLA-GP17693 338 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 TNFRSF1BP20333 461 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 PPIBP23284 216 aaKnown RBP5.29□□□□□ -1.56
CLK1-212ENST00000482590 GLRXP35754 106 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 RPL4P36578 427 aaKnown RBP5.29□□□□□ -1.56
CLK1-212ENST00000482590 UBE2KP61086 200 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 BTG1P62324 171 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 PUDPQ08623 228 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 PSG5Q15238 335 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 DGUOKQ16854 277 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 Q6ZTC4 211 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 Q6ZVQ6 151 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 SSX6Q7RTT6 188 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 TEX29Q8N6K0 151 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.29□□□□□ -1.56
CLK1-212ENST00000482590 OR5T2Q8NGG2 359 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 OR51F2Q8NH61 342 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 CLDND2Q8NHS1 167 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 ZNF418Q8TF45 676 aaPredicted RBP5.29□□□□□ -1.56
CLK1-212ENST00000482590 RORBQ92753 470 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 MAL2Q969L2 176 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 ZMYND19Q96E35 227 aaPredicted RBP5.29□□□□□ -1.56
CLK1-212ENST00000482590 CENPNQ96H22 339 aaPredicted RBP5.29□□□□□ -1.56
CLK1-212ENST00000482590 EMC6Q9BV81 110 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 MMP28Q9H239 520 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 METTL17Q9H7H0 456 aaPredicted RBP5.29□□□□□ -1.56
CLK1-212ENST00000482590 TMEM27Q9HBJ8 222 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 PLEKHJ1Q9NW61 149 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 MED29Q9NX70 200 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 ANGPT4Q9Y264 503 aa5.29□□□□□ -1.56
CLK1-212ENST00000482590 IGKV1D-42A0A075B6H8 117 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 A0A087WUJ7 227 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 A0A0B4J2E0 115 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 A0A1B0GX12 115 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 PRORSD1PA6NEY8 169 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 C11orf98E9PRG8 122 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 OR7A10O76100 309 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 BGLAPP02818 100 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 FABP1P07148 127 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 MSMBP08118 114 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 OR4E1P0C645 316 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 T-ENOLP0DO92 83 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 HLA-DOBP13765 273 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 MGMTP16455 207 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 ZNF14P17017 642 aaPredicted RBP5.28□□□□□ -1.56
CLK1-212ENST00000482590 CA6P23280 308 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 EVX1P49640 407 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 NKX2-5P52952 324 aaPredicted RBP5.28□□□□□ -1.56
CLK1-212ENST00000482590 CDK6Q00534 326 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 TPBGQ13641 420 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 LAGE3Q14657 143 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 MAD2L1BPQ15013 274 aaPredicted RBP5.28□□□□□ -1.56
CLK1-212ENST00000482590 DUSP7Q16829 419 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 ATP6V1FQ16864 119 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 DHRS4L2Q6PKH6 230 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 SSX7Q7RTT5 188 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 C20orf196Q8IYI0 205 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 TCEANCQ8N8B7 351 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 SLC37A3Q8NCC5 494 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 OR5J2Q8NH18 312 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 RDH5Q92781 318 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 OR52B2Q96RD2 323 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 MICU1Q9BPX6 476 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 ZNF385DQ9H6B1 395 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 RETNQ9HD89 108 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 SLC22A13Q9Y226 551 aa5.28□□□□□ -1.56
CLK1-212ENST00000482590 RCL1Q9Y2P8 373 aaKnown RBP5.28□□□□□ -1.56
CLK1-212ENST00000482590 LOC102725191A0A1B0GVB3 256 aa5.27□□□□□ -1.57
CLK1-212ENST00000482590 EVPLLA8MZ36 301 aa5.27□□□□□ -1.57
CLK1-212ENST00000482590 SNURFLB1AK76 121 aa5.27□□□□□ -1.57
CLK1-212ENST00000482590 H0YJX3 145 aa5.27□□□□□ -1.57
CLK1-212ENST00000482590 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.27□□□□□ -1.57
CLK1-212ENST00000482590 GOSR2O14653 212 aa5.27□□□□□ -1.57
CLK1-212ENST00000482590 HSD17B6O14756 317 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms