RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZNF300Q96RE9 604 aaPredicted RBP3.22□□□□□ -1.89
VPS41-212ENST00000482217 PITX2Q99697 317 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 PITPNM3Q9BZ71 974 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 ULBP3Q9BZM4 244 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 SLIRPQ9GZT3 109 aaKnown RBP3.22□□□□□ -1.89
VPS41-212ENST00000482217 LPAR5Q9H1C0 372 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 OR52D1Q9H346 318 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 CDC42EP4Q9H3Q1 356 aaKnown RBP3.22□□□□□ -1.89
VPS41-212ENST00000482217 ZDHHC11Q9H8X9 412 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 PLSCR3Q9NRY6 295 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 SPANXA1Q9NS26 97 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 KCNIP1Q9NZI2 227 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 DNAJC27Q9NZQ0 273 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 GLS2Q9UI32 602 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 ZNF230Q9UIE0 474 aaPredicted RBP3.22□□□□□ -1.89
VPS41-212ENST00000482217 TNFSF18Q9UNG2 199 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 PROCRQ9UNN8 238 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 AKAP12Q02952 1782 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 NOTCH4Q99466 2003 aa3.22□□□□□ -1.89
VPS41-212ENST00000482217 TTC37Q6PGP7 1564 aa3.21□□□□□ -1.89
VPS41-212ENST00000482217 DICER1Q9UPY3 1922 aaKnown RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 BCL9O00512 1426 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 ZNF608Q9ULD9 1512 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 TRAV36DV7A0A075B6V5 113 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 TMEM189A5PLL7 270 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 E7EQ34 232 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 E9PLD3 99 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 K7ENP7 123 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 LMX1BO60663 402 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 FRAT2O75474 233 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 TRMUO75648 421 aaKnown RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 KBTBD11O94819 623 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 CCNE2O96020 404 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 TSHBP01222 138 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 IGLV2-11P01706 119 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 PRSS1P07477 247 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 FCGR3AP08637 254 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 OR5H8P0DN80 308 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 FGF6P10767 208 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 CPMP14384 443 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 RCC1P18754 421 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 ATF1P18846 271 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 BLVRBP30043 206 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 DDTP30046 118 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 MARCKSL1P49006 195 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 LHX2P50458 406 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 EMP1P54849 157 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 MFAP2P55001 183 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 C1DQ13901 141 aaKnown RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 JOSD1Q15040 202 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 MLF2Q15773 248 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 TAF9Q16594 264 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 IAH1Q2TAA2 248 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 CDNFQ49AH0 187 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 KLF17Q5JT82 389 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 WDR38Q5JTN6 314 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 AKR1C8PQ5T2L2 129 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 STPG1Q5TH74 334 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 STEAP4Q687X5 459 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 SLC35E4Q6ICL7 350 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 AGTRAPQ6RW13 159 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 ZNF620Q6ZNG0 422 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 DGAT2L6Q6ZPD8 337 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 LYG1Q8N1E2 194 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 CIARTQ8N365 385 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 C11orf72Q8NBR9 251 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 CHST4Q8NCG5 386 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 SLC30A7Q8NEW0 376 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 OR4C6Q8NH72 309 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 THEM6Q8WUY1 208 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 LRRC29Q8WV35 223 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 OR5P3Q8WZ94 311 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 BORCS7Q96B45 105 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 RNF185Q96GF1 192 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 TMEM101Q96IK0 257 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 SLC35G5Q96KT7 338 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 RDH12Q96NR8 316 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 GPR82Q96P67 336 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 OR4K3Q96R72 315 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 OR7D2Q96RA2 312 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 OR52E6Q96RD3 313 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 HSPB9Q9BQS6 159 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 SULT4A1Q9BR01 284 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 NDFIP1Q9BT67 221 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 LINC00470Q9BZP3 86 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 C20orf27Q9GZN8 174 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 TMEM126AQ9H061 195 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 SH3BGRL3Q9H299 93 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 POPDC3Q9HBV1 291 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 DEPPQ9NTK1 212 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 LYRM2Q9NU23 88 aaPredicted RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 RBFOX1Q9NWB1 397 aaKnown RBP3.21□□□□□ -1.9
VPS41-212ENST00000482217 SPRR3Q9UBC9 169 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 ERG28Q9UKR5 140 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 KIF15Q9NS87 1388 aa3.21□□□□□ -1.9
VPS41-212ENST00000482217 TNS3Q68CZ2 1445 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 OTOFQ9HC10 1997 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 A0A087WUU8 490 aa3.2□□□□□ -1.9
VPS41-212ENST00000482217 LOC102724200A0A096LPH7 203 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms