RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 GGNBP1Q5YKI7 109 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 OR10J5Q8NHC4 309 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 LILRB1Q8NHL6 650 aaPredicted RBP13.32□□□□□ -0.28
RXRA-202ENST00000481739 PRR7Q8TB68 274 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 COQ3Q9NZJ6 369 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 JKAMPQ9P055 326 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 TAAR3PQ9P1P4 343 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 PRR14LQ5THK1 2151 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 LEUTXA8MZ59 168 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 H0YL77 283 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 IFNL4K9M1U5 179 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 M0R1B8 84 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 PTBP3O95758 552 aaKnown RBP13.32□□□□□ -0.28
RXRA-202ENST00000481739 HAND1O96004 215 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 GNRHRP30968 328 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 FABP6P51161 128 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 SMIM21Q3B7S5 101 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 C6orf183Q5T699 404 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 STOML3Q8TAV4 291 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 GLYATL2Q8WU03 294 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 MSI2Q96DH6 328 aaKnown RBP13.32□□□□□ -0.28
RXRA-202ENST00000481739 SLC25A32Q9H2D1 315 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 SEBOXQ9HB31 216 aaPredicted RBP13.32□□□□□ -0.28
RXRA-202ENST00000481739 MBNL3Q9NUK0 354 aaKnown RBP13.32□□□□□ -0.28
RXRA-202ENST00000481739 PRR13Q9NZ81 148 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 OR2W1Q9Y3N9 320 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 WIPI2Q9Y4P8 454 aa13.32□□□□□ -0.28
RXRA-202ENST00000481739 C3orf85A0A1B0GTC6 90 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 FAM90A27PA6NNH2 459 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 MPTX1A8MV57 137 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 ATXN7O15265 892 aaPredicted RBP13.31□□□□□ -0.28
RXRA-202ENST00000481739 IGHV3-13P01766 116 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 WNT2P09544 360 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 RRASP10301 218 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 CD200P41217 278 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 RAB32Q13637 225 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 FAM90A1Q86YD7 464 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 H1FOOQ8IZA3 346 aaPredicted RBP13.31□□□□□ -0.28
RXRA-202ENST00000481739 OR10Z1Q8NGY1 313 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 C18orf12Q96KH6 178 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 CITED4Q96RK1 184 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 ZNF471Q9BX82 626 aaPredicted RBP13.31□□□□□ -0.28
RXRA-202ENST00000481739 SLC5A7Q9GZV3 580 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 TMEM222Q9H0R3 208 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 GSKIPQ9P0R6 139 aa13.31□□□□□ -0.28
RXRA-202ENST00000481739 HEATR1Q9H583 2144 aaKnown RBP13.3□□□□□ -0.28
RXRA-202ENST00000481739 IGKV1-6A0A0C4DH72 117 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 A6NLC8 198 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 H0YIZ8 118 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 SIRPB1O00241 398 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 PHF1O43189 567 aaPredicted RBP13.3□□□□□ -0.28
RXRA-202ENST00000481739 ZNF205O95201 554 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 SPDEFO95238 335 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 CHRNB4P30926 498 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 CFHR2P36980 270 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 EIF5AP63241 154 aaKnown RBP13.3□□□□□ -0.28
RXRA-202ENST00000481739 NKX6-1P78426 367 aaPredicted RBP13.3□□□□□ -0.28
RXRA-202ENST00000481739 ALKAL2Q6UX46 152 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 WDR82Q6UXN9 313 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 ACP7Q6ZNF0 438 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 Q6ZR03 302 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 C11orf53Q8IXP5 236 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 SECTM1Q8WVN6 248 aa13.3□□□□□ -0.28
RXRA-202ENST00000481739 TMEM30CPA0ZSE6 113 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 F5H0A9 414 aaPredicted RBP13.29□□□□□ -0.28
RXRA-202ENST00000481739 TAAR5O14804 337 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 CDS2O95674 445 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 NMBP08949 121 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 CCKARP32238 428 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 C20orf204Q6ZNR8 217 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 IL22RA2Q969J5 263 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 MRPL24Q96A35 216 aaKnown RBP13.29□□□□□ -0.28
RXRA-202ENST00000481739 TMEM56Q96MV1 263 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 SPIN2AQ99865 258 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 SPIN2BQ9BPZ2 258 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 SHARPINQ9H0F6 387 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 TRAPPC2LQ9UL33 140 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 TMEM56-RWDD3S4R434 201 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 ESPL1Q14674 2120 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 DEDDO75618 318 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 TPT1P13693 172 aaKnown RBP13.29□□□□□ -0.28
RXRA-202ENST00000481739 ASCL1P50553 236 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 LUMP51884 338 aaPredicted RBP13.29□□□□□ -0.28
RXRA-202ENST00000481739 KLF3P57682 345 aaPredicted RBP13.29□□□□□ -0.28
RXRA-202ENST00000481739 SELENOVP59797 346 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 S100A10P60903 97 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 ADORA2A-AS1P86434 159 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 PAX5Q02548 391 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 HMGN3Q15651 99 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 IGFBP7Q16270 282 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 SLC35E4Q6ICL7 350 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 COMMD7Q86VX2 200 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 PDZD9Q8IXQ8 264 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 LRRC20Q8TCA0 184 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 KCNIP1Q9NZI2 227 aa13.29□□□□□ -0.28
RXRA-202ENST00000481739 IGLV3-9A0A075B6K5 115 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 RCC1P18754 421 aaPredicted RBP13.28□□□□□ -0.28
RXRA-202ENST00000481739 GNLYP22749 145 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 TLE1Q04724 770 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms