RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 OR13C5Q8NGS8 318 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 OR52N1Q8NH53 320 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 UBALD1Q8TB05 177 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 NEK7Q8TDX7 302 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 RCC1LQ96I51 464 aaKnown RBP12.09□□□□□ -0.47
LIMS3-203ENST00000480744 NOL4LQ96MY1 436 aaPredicted RBP12.09□□□□□ -0.47
LIMS3-203ENST00000480744 VCXQ9H320 206 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 LINC00574Q9H8X3 128 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 TMEM138Q9NPI0 162 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 LINC00527Q9UJ94 153 aa12.09□□□□□ -0.47
LIMS3-203ENST00000480744 TMEM30CPA0ZSE6 113 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 SERPINE3A8MV23 424 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 HSD17B6O14756 317 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 GEMIN2O14893 280 aaKnown RBP12.08□□□□□ -0.48
LIMS3-203ENST00000480744 BDKRB2P30411 391 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 REG1BP48304 166 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 PAX5Q02548 391 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 C5orf56Q8N8D9 126 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 Q8NFD4 153 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 CCDC107Q8WV48 283 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 ZNF281Q9Y2X9 895 aa12.08□□□□□ -0.48
LIMS3-203ENST00000480744 RRP15Q9Y3B9 282 aaKnown RBP12.08□□□□□ -0.48
LIMS3-203ENST00000480744 SIRT4Q9Y6E7 314 aaPredicted RBP12.08□□□□□ -0.48
LIMS3-203ENST00000480744 IGHV3-72A0A0B4J1Y9 119 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 K7EIL1 84 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 CCRL2O00421 344 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 SDCBPO00560 298 aaPredicted RBP12.07□□□□□ -0.48
LIMS3-203ENST00000480744 DUS4LO95620 317 aaKnown RBP12.07□□□□□ -0.48
LIMS3-203ENST00000480744 MYL12AP19105 171 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 DCKP27707 260 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 SLC22A6Q4U2R8 563 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 IZUMO2Q6UXV1 221 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 SLC16A12Q6ZSM3 486 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 OR51D1Q8NGF3 324 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 CHPT1Q8WUD6 406 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 GGHQ92820 318 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 ARL11Q969Q4 196 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 ZNF184Q99676 751 aaPredicted RBP12.07□□□□□ -0.48
LIMS3-203ENST00000480744 PAK1IP1Q9NWT1 392 aaPredicted RBP12.07□□□□□ -0.48
LIMS3-203ENST00000480744 IL36GQ9NZH8 169 aa12.07□□□□□ -0.48
LIMS3-203ENST00000480744 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 IGHV1-3A0A0C4DH29 117 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 A0A1W2PP11 408 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 IRGMA1A4Y4 181 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 FGF16O43320 207 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 GAPDHP04406 335 aaKnown RBP12.06□□□□□ -0.48
LIMS3-203ENST00000480744 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 GZMHP20718 246 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 HOXD3P31249 432 aaPredicted RBP12.06□□□□□ -0.48
LIMS3-203ENST00000480744 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
LIMS3-203ENST00000480744 SLC35B1P78383 322 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 DOC2BQ14184 412 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 NHLRC3Q5JS37 347 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 C8orf86Q6ZUL3 223 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 LINC00596Q86U02 117 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 MRPL41Q8IXM3 137 aaKnown RBP12.06□□□□□ -0.48
LIMS3-203ENST00000480744 LINC00482Q8N8I6 264 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 ZFP41Q8N8Y5 198 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 DPF1Q92782 380 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 SMIM19Q96E16 107 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 IFT22Q9H7X7 185 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 BABAM2Q9NXR7 383 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 CLEC2DQ9UHP7 191 aa12.06□□□□□ -0.48
LIMS3-203ENST00000480744 EXOSC1Q9Y3B2 195 aaKnown RBP12.06□□□□□ -0.48
LIMS3-203ENST00000480744 WI2-2373I1.2A0A1W2PRP0 233 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 NCBP2LA6PVI3 153 aaKnown RBP12.05□□□□□ -0.48
LIMS3-203ENST00000480744 AIPO00170 330 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 OGG1O15527 345 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 LALBAP00709 142 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 GTF2F2P13984 249 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 KRTAP10-11P60412 298 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 ZNF816Q0VGE8 651 aaPredicted RBP12.05□□□□□ -0.48
LIMS3-203ENST00000480744 MPV17LQ2QL34 196 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 FAM53AQ6NSI3 398 aaPredicted RBP12.05□□□□□ -0.48
LIMS3-203ENST00000480744 ETV3LQ6ZN32 361 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 C18orf65Q6ZTR6 163 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 OR2W3Q7Z3T1 314 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 FOXRED2Q8IWF2 684 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 STX19Q8N4C7 294 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 KLHL30-AS1Q8NEE0 82 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 GHSRQ92847 366 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 FKBP14Q9NWM8 211 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 CHCHD3Q9NX63 227 aaKnown RBP12.05□□□□□ -0.48
LIMS3-203ENST00000480744 CKLFQ9UBR5 152 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 PSORS1C1Q9UIG5 152 aa12.05□□□□□ -0.48
LIMS3-203ENST00000480744 DIMT1Q9UNQ2 313 aaKnown RBP12.05□□□□□ -0.48
LIMS3-203ENST00000480744 MAGEA13PA6NCF6 341 aa12.04□□□□□ -0.48
LIMS3-203ENST00000480744 C15orf65H3BRN8 121 aa12.04□□□□□ -0.48
LIMS3-203ENST00000480744 ZNF780AO75290 641 aaPredicted RBP12.04□□□□□ -0.48
LIMS3-203ENST00000480744 IL3RAP26951 378 aa12.04□□□□□ -0.48
LIMS3-203ENST00000480744 THBS3P49746 956 aa12.04□□□□□ -0.48
LIMS3-203ENST00000480744 MED21Q13503 144 aa12.04□□□□□ -0.48
LIMS3-203ENST00000480744 JAGN1Q8N5M9 183 aa12.04□□□□□ -0.48
LIMS3-203ENST00000480744 BPIFB6Q8NFQ5 453 aa12.04□□□□□ -0.48
LIMS3-203ENST00000480744 MUL1Q969V5 352 aa12.04□□□□□ -0.48
LIMS3-203ENST00000480744 TMEM80Q96HE8 168 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms