RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 NKX2-1P43699 371 aaPredicted RBP9.21□□□□□ -0.93
VPS52-217ENST00000478934 MEOX2P50222 304 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 UCP3P55916 312 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 ZNF154Q13106 437 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 FAM53AQ6NSI3 398 aaPredicted RBP9.21□□□□□ -0.93
VPS52-217ENST00000478934 ZNF565Q8N9K5 539 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 OR5C1Q8NGR4 320 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 OR51H1Q8NH63 302 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 DDA1Q9BW61 102 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 LINC00470Q9BZP3 86 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 ARV1Q9H2C2 271 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 OR1A1Q9P1Q5 309 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 FBXO9Q9UK97 447 aaPredicted RBP9.21□□□□□ -0.93
VPS52-217ENST00000478934 KPTNQ9Y664 436 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 CACNA1HO95180 2353 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 PROB1E7EW31 1015 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 TFF1P04155 84 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 SP1P08047 785 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 SP9P0CG40 484 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 PTAFRP25105 342 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 FAM180AQ6UWF9 173 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 MDP1Q86V88 176 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 MKXQ8IYA7 352 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 Q8NFD4 153 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 MRPL30Q8TCC3 161 aaKnown RBP9.21□□□□□ -0.94
VPS52-217ENST00000478934 OR5P3Q8WZ94 311 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 SPRR3Q9UBC9 169 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 POMT1Q9Y6A1 747 aa9.21□□□□□ -0.94
VPS52-217ENST00000478934 SULT1A1P50225 295 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 DYNLT3P51808 116 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 PCSK4Q6UW60 755 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 MCEMP1Q8IX19 187 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 GCNT2Q8N0V5 402 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 CCDC71LQ8N9Z2 235 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 HIST1H2AAQ96QV6 131 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 ZPBPQ9BS86 351 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 C11orf1Q9H5F2 150 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 TMED3Q9Y3Q3 217 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 MGAQ8IWI9 3026 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 C1orf196B1AJZ1 125 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 SS18L1O75177 396 aaPredicted RBP9.2□□□□□ -0.94
VPS52-217ENST00000478934 S100A6P06703 90 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 ZNF14P17017 642 aaPredicted RBP9.2□□□□□ -0.94
VPS52-217ENST00000478934 RAB5BP61020 215 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 TLE1Q04724 770 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 IL13RA2Q14627 380 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 EIF2S3LQ2VIR3 472 aaKnown RBP9.2□□□□□ -0.94
VPS52-217ENST00000478934 WDR86Q86TI4 376 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 PLPPR1Q8TBJ4 325 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 KCNJ16Q9NPI9 418 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 PLSCR2Q9NRY7 297 aa9.2□□□□□ -0.94
VPS52-217ENST00000478934 PCNX2A6NKB5 2137 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 K7N7A8 449 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 SIRPB1O00241 398 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 NQO2P16083 231 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 CEBPDP49716 269 aaPredicted RBP9.19□□□□□ -0.94
VPS52-217ENST00000478934 FABP9Q0Z7S8 132 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 TMEM164Q5U3C3 297 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 GPR157Q5UAW9 335 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 TMEM252Q8N6L7 170 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 IL22RA1Q8N6P7 574 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 C15orf54Q8N8G6 183 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 TECTBQ96PL2 329 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 ERRFI1Q9UJM3 462 aaPredicted RBP9.19□□□□□ -0.94
VPS52-217ENST00000478934 MMP24Q9Y5R2 645 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 URGCP-MRPS24S4R325 110 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 SVILO95425 2214 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 CHST1O43916 411 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 PGLYRP1O75594 196 aaPredicted RBP9.19□□□□□ -0.94
VPS52-217ENST00000478934 ZNF806P0C7X5 589 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 PLP2Q04941 152 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 TMEM267Q0VDI3 215 aaPredicted RBP9.19□□□□□ -0.94
VPS52-217ENST00000478934 SLC10A1Q14973 349 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 NRN1LQ496H8 165 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 HES3Q5TGS1 186 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 ZNF343Q6P1L6 599 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 Q6ZRM9 215 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 TMEM56Q96MV1 263 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 DLL3Q9NYJ7 618 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 TMEM56-RWDD3S4R434 201 aa9.19□□□□□ -0.94
VPS52-217ENST00000478934 CNOT1A5YKK6 2376 aaKnown RBP9.19□□□□□ -0.94
VPS52-217ENST00000478934 H0YL77 283 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 WRBO00258 174 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 TUSC2O75896 110 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 CDS2O95674 445 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 PSG2P11465 335 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 APLNRP35414 380 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 VAMP2P63027 116 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 CLN3Q13286 438 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 FAM58AQ8N1B3 248 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 OR5A2Q8NGI9 324 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 GPR87Q9BY21 358 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 SLC35B3Q9H1N7 401 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 FAM86C1Q9NVL1 165 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 ATP23Q9Y6H3 246 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 ANKRD30BLA7E2S9 258 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 TXNL1O43396 289 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 LYZL6O75951 148 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 SLC34A2O95436 690 aa9.18□□□□□ -0.94
VPS52-217ENST00000478934 ARR3P36575 388 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms