RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 C2orf68Q2NKX9 166 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 HLA-DRB5Q30154 266 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 C9orf152Q5JTZ5 239 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 RBM48Q5RL73 367 aaKnown RBP6.65□□□□□ -1.34
ERCC8-205ENST00000477893 C6orf141Q5SZD1 244 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 TPTE2P1Q5T6R2 138 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 FAM27D1Q5T7N8 215 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 FAM53AQ6NSI3 398 aaPredicted RBP6.65□□□□□ -1.34
ERCC8-205ENST00000477893 IZUMO2Q6UXV1 221 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 ASCL4Q6XD76 172 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 RTN4RL2Q86UN3 420 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 PRR18Q8N4B5 295 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 NANOGP1Q8N7R0 232 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 ZNF565Q8N9K5 539 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 FBLIM1Q8WUP2 373 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 CORO2AQ92828 525 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 MYDGFQ969H8 173 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 TOMM40LQ969M1 308 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 TMEM203Q969S6 136 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 RPEQ96AT9 228 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 SELENOIQ9C0D9 397 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 CCDC90BQ9GZT6 254 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 MMP28Q9H239 520 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 MMP27Q9H306 513 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 KCNK15Q9H427 330 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 RANBP3Q9H6Z4 567 aaPredicted RBP6.65□□□□□ -1.34
ERCC8-205ENST00000477893 PLCXD1Q9NUJ7 323 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 FKBP14Q9NWM8 211 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 SCN3BQ9NY72 215 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 IL36GQ9NZH8 169 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 PITPNC1Q9UKF7 332 aa6.65□□□□□ -1.34
ERCC8-205ENST00000477893 DSCAML1Q8TD84 2053 aa6.65□□□□□ -1.35
ERCC8-205ENST00000477893 A0A1W2PRX2 142 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 UBE2QL1A1L167 161 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 H0YHG0 523 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 BUB1B-PAK6H3BSN5 160 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 AIPO00170 330 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 SDCBPO00560 298 aaPredicted RBP6.64□□□□□ -1.35
ERCC8-205ENST00000477893 ZNF780AO75290 641 aaPredicted RBP6.64□□□□□ -1.35
ERCC8-205ENST00000477893 FBXO24O75426 580 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 IGLV1-47P01700 117 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 MAPK3P27361 379 aaPredicted RBP6.64□□□□□ -1.35
ERCC8-205ENST00000477893 BRS3P32247 399 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 CEACAM3P40198 252 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 MAP2K4P45985 399 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 REG1BP48304 166 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 ARHGDIBP52566 201 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 PRRX1P54821 245 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 DIAPH2-AS1Q14236 149 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 HES1Q14469 280 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 HNF4GQ14541 408 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 ACSM3Q53FZ2 586 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 LIPKQ5VXJ0 399 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 RAB12Q6IQ22 244 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 TMEM104Q8NE00 496 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 OR10V1Q8NGI7 309 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 OR10X1Q8NGY0 326 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 OR4K15Q8NH41 348 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 OR56B4Q8NH76 319 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 OR9G1Q8NH87 305 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 ARL11Q969Q4 196 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 CNBD2Q96M20 576 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 SLC25A33Q9BSK2 321 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 PRSS22Q9GZN4 317 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 ETAA1Q9NY74 926 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 PSG11Q9UQ72 335 aa6.64□□□□□ -1.35
ERCC8-205ENST00000477893 AMMECR1Q9Y4X0 333 aaPredicted RBP6.64□□□□□ -1.35
ERCC8-205ENST00000477893 NOTCH1P46531 2555 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 IGHV3-72A0A0B4J1Y9 119 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 MCRIP1C9JLW8 97 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 J3QR06 171 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 RGS10O43665 173 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 GPX5O75715 221 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 MPIG6BO95866 241 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 IGLV1-40P01703 118 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 LPLP06858 475 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 SNRNP70P08621 437 aaKnown RBP6.63□□□□□ -1.35
ERCC8-205ENST00000477893 MGMTP16455 207 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 CD34P28906 385 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 MNDAP41218 407 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 KCNJ3P48549 501 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 DYNLT3P51808 116 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 RPS25P62851 125 aaKnown RBP6.63□□□□□ -1.35
ERCC8-205ENST00000477893 GPR50Q13585 617 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 SPHARQ15513 63 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 MPV17LQ2QL34 196 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 ABCA11PQ4W5N1 156 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 KIAA2026Q5HYC2 2103 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 NHLRC3Q5JS37 347 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 KHDC1LQ5JSQ8 128 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 OR10K2Q6IF99 312 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 CEACAM19Q7Z692 300 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 LINC00596Q86U02 117 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 DRAM1Q8N682 238 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 NKAIN3Q8N8D7 197 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 Q8NFD4 153 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 UFD1Q92890 307 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 RBMXL1Q96E39 390 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms