RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 EME1Q96AY2 570 aa15.61■□□□□ 0.09
PDLIM1-202ENST00000477757 ALX4Q9H161 411 aaPredicted RBP15.61■□□□□ 0.09
PDLIM1-202ENST00000477757 WSB1Q9Y6I7 421 aa15.61■□□□□ 0.09
PDLIM1-202ENST00000477757 TRAV39A0A0B4J263 110 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 HSPA12AO43301 675 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 TXNL1O43396 289 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 OR2T7P0C7T2 308 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 SLC2A2P11168 524 aaPredicted RBP15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 DBTP11182 482 aaKnown RBP15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 IL3RAP26951 378 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 RAB9AP51151 201 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 GALEQ14376 348 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 TCEANCQ8N8B7 351 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 OR52M1Q8NGK5 317 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 IL17DQ8TAD2 202 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 ASB9Q96DX5 294 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 LRGUKQ96M69 825 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 MYRFQ9Y2G1 1151 aa15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 MRPS28Q9Y2Q9 187 aaKnown RBP15.6■□□□□ 0.09
PDLIM1-202ENST00000477757 ATP6V0E1O15342 81 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 IFNA6P05013 189 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 ISG15P05161 165 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 PITPNAQ00169 270 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 HAGHQ16775 308 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 ELP2Q6IA86 826 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 FAM220AQ7Z4H9 259 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 UTP4Q969X6 686 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 RBMXL1Q96E39 390 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 FAM107BQ9H098 131 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 TOLLIPQ9H0E2 274 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 ZCCHC4Q9H5U6 513 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 TPSG1Q9NRR2 321 aa15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 WARS2Q9UGM6 360 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-202ENST00000477757 TRAV41A0A0B4J266 112 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 LGALS1P09382 135 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 TMEM225BP0DP42 221 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 ZNF137PP52743 207 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 FAHD1Q6P587 224 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 OR10H4Q8NGA5 316 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 OR2G2Q8NGZ5 317 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 CANT1Q8WVQ1 401 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 OR4C12Q96R67 309 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 FAM118AQ9NWS6 357 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 GNG8Q9UK08 70 aa15.58■□□□□ 0.08
PDLIM1-202ENST00000477757 IGHV4OR15-8A0A075B7B6 117 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 A0A087WW49 117 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 C15orf65H3BRN8 121 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 SDCBPO00560 298 aaPredicted RBP15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 HLA-DRB1P01911 266 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 HOXB6P17509 224 aaKnown RBP15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 IL13RA2Q14627 380 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 MMDQ15546 238 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 TP53I3Q53FA7 332 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 C12orf73Q69YU5 71 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 HAPLN4Q86UW8 402 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 MINDY2Q8NBR6 621 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 CCDC124Q96CT7 223 aaKnown RBP15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 NR1H4Q96RI1 486 aaPredicted RBP15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 IL4I1Q96RQ9 567 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 PARP11Q9NR21 331 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 GFOD1Q9NXC2 390 aa15.57■□□□□ 0.08
PDLIM1-202ENST00000477757 IGLV1-51P01701 117 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 GZMHP20718 246 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 VHLP40337 213 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 KISS1Q15726 138 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 Q3ZCU0 254 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 OR51A4Q8NGJ6 313 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 OR13C3Q8NGS6 347 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 OR10AC1Q8NH08 325 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 STUB1Q9UNE7 303 aa15.56■□□□□ 0.08
PDLIM1-202ENST00000477757 SLC25A48Q6ZT89 311 aaKnown RBP15.55■□□□□ 0.08
PDLIM1-202ENST00000477757 FRRS1LQ9P0K9 344 aa15.55■□□□□ 0.08
PDLIM1-202ENST00000477757 IGHV7-81A0A0B4J1V7 117 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 RBMY1BA6NDE4 496 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 RBMY1EA6NEQ0 496 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 ZAR1LA6NP61 321 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 B2RBV5 119 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 SLC31A2O15432 143 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 FAM107AO95990 144 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 RBMY1DP0C7P1 496 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 ARSBP15848 533 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 EPHA2P29317 976 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 BLVRBP30043 206 aaPredicted RBP15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 DAPP51397 102 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 NANOS3P60323 173 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 ZNF85Q03923 595 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 LSAMPQ13449 338 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 ZSCAN26Q16670 478 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 PIGYQ3MUY2 71 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 C19orf54Q5BKX5 351 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 FDX2Q6P4F2 183 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 ZNF439Q8NDP4 499 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 PXT1Q8NFP0 134 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 UBALD1Q8TB05 177 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 ARL11Q969Q4 196 aa15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 DPCDQ9BVM2 203 aaPredicted RBP15.54■□□□□ 0.08
PDLIM1-202ENST00000477757 RYR1P21817 5038 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 IGHV3-43A0A0B4J1X8 118 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 TMEM30CPA0ZSE6 113 aa15.53■□□□□ 0.08
PDLIM1-202ENST00000477757 AQP12BA6NM10 295 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms