RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 GNG2P59768 71 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 ARF6P62330 175 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 MADCAM1Q13477 382 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 MOB1BQ7L9L4 216 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 SETD6Q8TBK2 473 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 DMRTB1Q96MA1 342 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 TMPRSS13Q9BYE2 586 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 KPTNQ9Y664 436 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 A3GALT2U3KPV4 340 aa12.6□□□□□ -0.39
SEC13-215ENST00000477547 ZNF729A6NN14 1252 aaPredicted RBP12.59□□□□□ -0.39
SEC13-215ENST00000477547 A8MV72 311 aaPredicted RBP12.59□□□□□ -0.39
SEC13-215ENST00000477547 NAPSAO96009 420 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 SSTR5P35346 364 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 MNDAP41218 407 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 DLX6P56179 175 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 PAX8Q06710 450 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 CR1LQ2VPA4 569 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 CNPY1Q3B7I2 92 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 ZNF260Q3ZCT1 412 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 CDNFQ49AH0 187 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 C6orf183Q5T699 404 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 CNIH2Q6PI25 160 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 TRAT1Q6PIZ9 186 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 NUDCD2Q8WVJ2 157 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 WDFY2Q96P53 400 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 PCGF1Q9BSM1 259 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 SIRPDQ9H106 197 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 MMP27Q9H306 513 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 RIMS4Q9H426 269 aaPredicted RBP12.59□□□□□ -0.39
SEC13-215ENST00000477547 C7orf69Q9H7B7 122 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 TAS2R3Q9NYW6 316 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 CALYQ9NYX4 217 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 ELF5Q9UKW6 265 aaPredicted RBP12.59□□□□□ -0.39
SEC13-215ENST00000477547 AUP1Q9Y679 476 aa12.59□□□□□ -0.39
SEC13-215ENST00000477547 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
SEC13-215ENST00000477547 CUBNO60494 3623 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 hCG_1809904A0A1W2PP81 198 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 A0A1W2PPE2 198 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 A0A1W2PR64 198 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 A0A1W2PRV1 198 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 CRLF1O75462 422 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 TOX4O94842 621 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 PNLIPRP3Q17RR3 467 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 PRAMEF5Q5TYX0 476 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 HACD4Q5VWC8 232 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 Q6ZPA2 131 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 VMO1Q7Z5L0 202 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 CORO2AQ92828 525 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 AUNIPQ9H7T9 357 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 SIRT7Q9NRC8 400 aa12.58□□□□□ -0.4
SEC13-215ENST00000477547 MBNL3Q9NUK0 354 aaKnown RBP12.58□□□□□ -0.4
SEC13-215ENST00000477547 TRBV6-6A0A0A6YYG2 114 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 RBP4P02753 201 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 FCGR3AP08637 254 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 PTHLHP12272 177 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 MMP9P14780 707 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 RCC1P18754 421 aaPredicted RBP12.57□□□□□ -0.4
SEC13-215ENST00000477547 S100A5P33763 92 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 HLA-DRB3P79483 266 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 ZNF782Q6ZMW2 699 aaPredicted RBP12.57□□□□□ -0.4
SEC13-215ENST00000477547 SNX29P2Q8IUI4 249 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 Q8N7P7 452 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 ZNF565Q8N9K5 539 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 UBALD1Q8TB05 177 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 GCDHQ92947 438 aaPredicted RBP12.57□□□□□ -0.4
SEC13-215ENST00000477547 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 TBX15Q96SF7 602 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 METTL8Q9H825 291 aaKnown RBP12.57□□□□□ -0.4
SEC13-215ENST00000477547 KCNIP1Q9NZI2 227 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 OPN4Q9UHM6 478 aa12.57□□□□□ -0.4
SEC13-215ENST00000477547 MRPS7Q9Y2R9 242 aaKnown RBP12.57□□□□□ -0.4
SEC13-215ENST00000477547 KBTBD11-OT1A0A1B0GTJ5 212 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 C17orf98A8MV24 154 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 C12orf77C9JDV5 145 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 OMGP23515 440 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 DLX1P56177 255 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 ERVFRD-1P60508 538 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 PITPNAQ00169 270 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 PRB3Q04118 309 aaPredicted RBP12.56□□□□□ -0.4
SEC13-215ENST00000477547 C17orf58Q2M2W7 97 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 ZNF880Q6PDB4 577 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 BAIAP2L2Q6UXY1 529 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 PRR18Q8N4B5 295 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 UPRTQ96BW1 309 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 RAB9BQ9NP90 201 aa12.56□□□□□ -0.4
SEC13-215ENST00000477547 C15orf65H3BRN8 121 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 ORC5O43913 435 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 SSX5O60225 188 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 AVPP01185 164 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 CGB3P0DN86 165 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 CGB7P0DN87 165 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 IGHV1-8P0DP01 117 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 HNF1AP20823 631 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 DTYMKP23919 212 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 GUCA2AQ02747 115 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 KLRD1Q13241 179 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 HMGN3Q15651 99 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 LTC4SQ16873 150 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 NCR3LG1Q68D85 454 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms