RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 ABHD14AQ9BUJ0 271 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 PLK3Q9H4B4 646 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 CDH20Q9HBT6 801 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 SDF2L1Q9HCN8 221 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 DLL3Q9NYJ7 618 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 HS3ST3B1Q9Y662 390 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 CEP192Q8TEP8 1941 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 SMCO3A2RU48 225 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 CHST1O43916 411 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 CBR3O75828 277 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 OR7C1O76099 320 aaPredicted RBP11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 OMGP23515 440 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 CEACAM6P40199 344 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 RAB4BP61018 213 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 FGF12P61328 243 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 CXorf66Q5JRM2 361 aaPredicted RBP11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 MRPL14Q6P1L8 145 aaKnown RBP11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF818PQ6ZRF7 136 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF611Q8N823 705 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 DYRK2Q92630 601 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 C14orf144Q96I85 54 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 C1QTNF5Q9BXJ0 243 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 OR2H1Q9GZK4 316 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 SH2D2AQ9NP31 389 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 VAX2Q9UIW0 290 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 ATP23Q9Y6H3 246 aa11.63□□□□□ -0.55
HLA-DMA-208ENST00000477541 ARID1AO14497 2285 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 SLC22A20A6NK97 555 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 PHOX2AO14813 284 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZIC3O60481 467 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 CNOT4O95628 575 aaKnown RBP11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 SOD3P08294 240 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF32P17041 273 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 DDTP30046 118 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 PAX9P55771 341 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 HBG1P69891 147 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 HBG2P69892 147 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 PCOLCEQ15113 449 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF787Q6DD87 383 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 Q6ZPA2 131 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 SSX9Q7RTT3 188 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 TMEM183AQ8IXX5 376 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 GAPTQ8N292 157 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 SLC25A45Q8N413 288 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 SUMF1Q8NBK3 374 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 DNASE2BQ8WZ79 361 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 NOL4LQ96MY1 436 aaPredicted RBP11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 PYGO2Q9BRQ0 406 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 GPR61Q9BZJ8 451 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 SMOC1Q9H4F8 434 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 SRD5A3Q9H8P0 318 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 CALHM2Q9HA72 323 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 SHANK1Q9Y566 2161 aa11.62□□□□□ -0.55
HLA-DMA-208ENST00000477541 CEP250Q9BV73 2442 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 FAM221AA4D161 298 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 CST7O76096 145 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 SRFP11831 508 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 FGF7P21781 194 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 ASCL1P50553 236 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 CEBPGP53567 150 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 PRAMEF20Q5VT98 475 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 SLC25A24Q6NUK1 477 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 DEFB119Q8N690 84 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 FRZBQ92765 325 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 PACRGQ96M98 296 aaPredicted RBP11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 UCN2Q96RP3 112 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF581Q9P0T4 197 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 TAAR3PQ9P1P4 343 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 TIMM9Q9Y5J7 89 aa11.61□□□□□ -0.55
HLA-DMA-208ENST00000477541 A0A0J9YW62 118 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 ARGFXA6NJG6 315 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 NPIPB11E5RHQ5 1161 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 TMEM50AO95807 157 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 KLK3P07288 261 aaPredicted RBP11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 GLI4P10075 376 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 EPHA1P21709 976 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 F2RP25116 425 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 SSR4P51571 173 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 FOXL2P58012 376 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 RAB11AP62491 216 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 PSG4Q00888 419 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 ZNF154Q13106 437 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 JOSD1Q15040 202 aaPredicted RBP11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 Q3ZCU0 254 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 ABLIM2Q6H8Q1 611 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 COLCA1Q6ZS62 124 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 MKXQ8IYA7 352 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 OR10A7Q8NGE5 316 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 ABHD5Q8WTS1 349 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 CA5BP1Q8WTZ4 195 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 PIGCQ92535 297 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 ACY3Q96HD9 319 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 BTF3L4Q96K17 158 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 FOXB1Q99853 325 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 CABLES2Q9BTV7 478 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 DUSP23Q9BVJ7 150 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 MAGT1Q9H0U3 335 aa11.6□□□□□ -0.55
HLA-DMA-208ENST00000477541 WNT5BQ9H1J7 359 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms