RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 ZNF107Q9UII5 783 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-221ENST00000477203 RFPL4AA6NLU0 287 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 RFPL4AL1F8VTS6 287 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 SLC31A2O15432 143 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 LRP3O75074 770 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 RCC1P18754 421 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-221ENST00000477203 FPR2P25090 351 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 FAM24BQ8N5W8 94 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 TMEM68Q96MH6 324 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 ATG101Q9BSB4 218 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 TREM2Q9NZC2 230 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 DUSP13Q9UII6 198 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 WASF3Q9UPY6 502 aa11.43□□□□□ -0.58
HDAC7-221ENST00000477203 BTBD17A6NE02 478 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 TCAPO15273 167 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 TBPP20226 339 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 PARP12Q9H0J9 701 aaKnown RBP11.42□□□□□ -0.58
HDAC7-221ENST00000477203 ZNF391Q9UJN7 358 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 SFT2D2O95562 160 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 SFTA3P0C7M3 94 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 ZNF728P0DKX0 622 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 CD80P33681 288 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 ZNF83P51522 516 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 GABRA6Q16445 453 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 ACTBL2Q562R1 376 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 C20orf204Q6ZNR8 217 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 MISP3Q96FF7 219 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 AKR1E2Q96JD6 320 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 NUDT16L1Q9BRJ7 211 aaKnown RBP11.42□□□□□ -0.58
HDAC7-221ENST00000477203 SMCO4Q9NRQ5 59 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 SMPD2O60906 423 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 AADACP22760 399 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 PSG7Q13046 419 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 ACSF3Q4G176 576 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-221ENST00000477203 C11orf87Q6NUJ2 197 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 UQCC3Q6UW78 93 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 RNASE11Q8TAA1 199 aaKnown RBP11.42□□□□□ -0.58
HDAC7-221ENST00000477203 OR5P3Q8WZ94 311 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 ZNF286AQ9HBT8 521 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 NECAP2Q9NVZ3 263 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 OR5AC2Q9NZP5 309 aa11.42□□□□□ -0.58
HDAC7-221ENST00000477203 WNT9BO14905 357 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 SOX15O60248 233 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 IGHG3P01860 377 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 NRN1LQ496H8 165 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 WDR86Q86TI4 376 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 LHFPL1Q86WI0 220 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 ZNF561Q8N587 486 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 MRPL24Q96A35 216 aaKnown RBP11.41□□□□□ -0.58
HDAC7-221ENST00000477203 BCL2L11O43521 198 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 SS18L1O75177 396 aaPredicted RBP11.41□□□□□ -0.58
HDAC7-221ENST00000477203 IL2RAP01589 272 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 OR5AC1P0C628 307 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 ID4P47928 161 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 RAB32Q13637 225 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 Q6ZT83 130 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 SMIM3Q9BZL3 60 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 GFOD1Q9NXC2 390 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 DKK4Q9UBT3 224 aa11.41□□□□□ -0.58
HDAC7-221ENST00000477203 LSM5Q9Y4Y9 91 aaKnown RBP11.41□□□□□ -0.58
HDAC7-221ENST00000477203 A0A0D9SG52 128 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 MSGN1A6NI15 193 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 H0YIZ8 118 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 HSD17B6O14756 317 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 DIRAS3O95661 229 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 BMP5P22003 454 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 S100A2P29034 98 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 UCP2P55851 309 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 NDUFA6P56556 154 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 TAS2R31P59538 309 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 TAS2R60P59551 318 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 HERV-K104P61576 105 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 GNG3P63215 75 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 PRAMEF6Q5VXH4 476 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 PEG10Q86TG7 708 aaKnown RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 CISD2Q8N5K1 135 aaKnown RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 RTN4IP1Q8WWV3 396 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 METTL1Q9UBP6 276 aaKnown RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 A0A087X0M5 115 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 A0A1B0GX30 115 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 SURF2Q15527 256 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 MPPED2Q15777 294 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 IAH1Q2TAA2 248 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 FAM76BQ5HYJ3 339 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 SGPP2Q8IWX5 399 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 SUMF2Q8NBJ7 301 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 INO80EQ8NBZ0 244 aaPredicted RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 OR10D4PQ8NGN7 298 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 RRNAD1Q96FB5 475 aaKnown RBP11.4□□□□□ -0.58
HDAC7-221ENST00000477203 SCNM1Q9BWG6 230 aa11.4□□□□□ -0.58
HDAC7-221ENST00000477203 SLC34A2O95436 690 aa11.4□□□□□ -0.59
HDAC7-221ENST00000477203 CECR9P0C854 216 aa11.4□□□□□ -0.59
HDAC7-221ENST00000477203 COX5BP10606 129 aa11.4□□□□□ -0.59
HDAC7-221ENST00000477203 PSMB6P28072 239 aa11.4□□□□□ -0.59
HDAC7-221ENST00000477203 MRPL49Q13405 166 aaKnown RBP11.4□□□□□ -0.59
HDAC7-221ENST00000477203 GAMTQ14353 236 aa11.4□□□□□ -0.59
HDAC7-221ENST00000477203 SEM1Q6ZVN7 128 aa11.4□□□□□ -0.59
HDAC7-221ENST00000477203 TPRX1Q8N7U7 411 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms