RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 HLA-DRB5Q30154 266 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 Q8N2B8 174 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 OR9G1Q8NH87 305 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 TMEM203Q969S6 136 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 Q9H521 79 aa13.03□□□□□ -0.32
COL1A1-205ENST00000476387 AMMECR1Q9Y4X0 333 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-205ENST00000476387 FAM90A10PA6NDY2 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A18PA6NE21 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A16PA6NEW6 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A20PA6NIJ5 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A7PA6NKC0 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A22PA8MWA6 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A12PA8MX19 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A5PA8MXJ8 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A23PA8MXZ1 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 AIPO00170 330 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 SC5DO75845 299 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 IGLV1-47P01700 117 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 UCHL1P09936 223 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A15PP0C7V4 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A13PP0C7W8 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A14PP0C7W9 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM90A24PP0C7X0 464 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 CGB3P0DN86 165 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 CGB7P0DN87 165 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 BRS3P32247 399 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 TBCEQ15813 527 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-205ENST00000476387 RAB12Q6IQ22 244 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 TMEM219Q86XT9 240 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 LYPD6Q86Y78 171 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 OR10A7Q8NGE5 316 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 RFESDQ8TAC1 157 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 FAM46BQ96A09 425 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 Q96M66 194 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 MMP28Q9H239 520 aa13.02□□□□□ -0.33
COL1A1-205ENST00000476387 RCC2Q9P258 522 aaKnown RBP13.02□□□□□ -0.33
COL1A1-205ENST00000476387 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 A6NDX4 124 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 BUB1B-PAK6H3BSN5 160 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 ARL6IP5O75915 188 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 CPEP16870 476 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 JUNBP17275 347 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-205ENST00000476387 SRMP19623 302 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 GZMHP20718 246 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 MAP2K4P45985 399 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 GP2P55259 537 aaKnown RBP13.01□□□□□ -0.33
COL1A1-205ENST00000476387 RPS25P62851 125 aaKnown RBP13.01□□□□□ -0.33
COL1A1-205ENST00000476387 TPTE2P1Q5T6R2 138 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 CCDC144NLQ6NUI1 221 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 ZNF497Q6ZNH5 498 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 ZNF367Q7RTV3 350 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 TMEM104Q8NE00 496 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 MGLLQ99685 303 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 LINC00574Q9H8X3 128 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 ZNF702PQ9H963 129 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 ETAA1Q9NY74 926 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 PEX16Q9Y5Y5 336 aa13.01□□□□□ -0.33
COL1A1-205ENST00000476387 NPIPB11E5RHQ5 1161 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 MPIG6BO95866 241 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 OPN1MWP04001 364 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 OPN1MW2P0DN77 364 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 OPN1MW3P0DN78 364 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 MNDAP41218 407 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 GNG10P50151 68 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 ARSJQ5FYB0 599 aaPredicted RBP13□□□□□ -0.33
COL1A1-205ENST00000476387 CCBE1Q6UXH8 406 aaPredicted RBP13□□□□□ -0.33
COL1A1-205ENST00000476387 CCDC107Q8WV48 283 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 CAPSLQ8WWF8 208 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 LEAP2Q969E1 77 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 TOMM40LQ969M1 308 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 ARL11Q969Q4 196 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 RPEQ96AT9 228 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 RAB9BQ9NP90 201 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 NOTCH3Q9UM47 2321 aa13□□□□□ -0.33
COL1A1-205ENST00000476387 OOSP1A8MZH6 123 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 J3QR06 171 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 PDCD6O75340 191 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 CA11O75493 328 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 IGHV3-7P01780 117 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 VSIG10L2P0DP72 767 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 FUT3P21217 361 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 HTR2CP28335 458 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 GABARAPL2P60520 117 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 C1orf100Q5SVJ3 147 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 SLC16A12Q6ZSM3 486 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 OR6M1Q8NGM8 313 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 OR10X1Q8NGY0 326 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 AKR1E2Q96JD6 320 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 TMEM59Q9BXS4 323 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 PRSS22Q9GZN4 317 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 TRAPPC2LQ9UL33 140 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 PSG11Q9UQ72 335 aa12.99□□□□□ -0.33
COL1A1-205ENST00000476387 SDCBPO00560 298 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-205ENST00000476387 ORC5O43913 435 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 MT-ND4P03905 459 aa12.98□□□□□ -0.33
COL1A1-205ENST00000476387 GLAP06280 429 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms