RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 TMED7-TICAM2A0A0A6YYA0 188 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 MAP1LC3B2A6NCE7 125 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 NUPR1O60356 82 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 SAP30O75446 220 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 TMEM50AO95807 157 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 PDGFBP01127 241 aaPredicted RBP9.12□□□□□ -0.95
ABCF1-205ENST00000475993 BMP5P22003 454 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 TNFSF4P23510 183 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
ABCF1-205ENST00000475993 FXYD4P59646 89 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 EIF3IQ13347 325 aaKnown RBP9.12□□□□□ -0.95
ABCF1-205ENST00000475993 BSXQ3C1V8 233 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 SAMD13Q5VXD3 122 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 TMEM217Q8N7C4 229 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 SUMF1Q8NBK3 374 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 OR11L1Q8NGX0 322 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 ZNF48Q96MX3 618 aaPredicted RBP9.12□□□□□ -0.95
ABCF1-205ENST00000475993 SMIM7Q9BQ49 75 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 APOOQ9BUR5 198 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 MAP1LC3BQ9GZQ8 125 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 CLN8Q9UBY8 286 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 LAMA2P24043 3122 aaKnown RBP9.12□□□□□ -0.95
ABCF1-205ENST00000475993 PRSS38A1L453 326 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 ZNF850A8MQ14 1090 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 MS4A18H0YCH9 400 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 CORTO00230 105 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 CXCL10P02778 98 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 GP1BBP13224 206 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 ARF6P62330 175 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 GAB4Q2WGN9 574 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 MS4A18Q3C1V0 323 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 MRGPRGQ86SM5 289 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 CPT1CQ8TCG5 803 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 NXF5Q9H1B4 397 aaKnown RBP9.12□□□□□ -0.95
ABCF1-205ENST00000475993 PRTFDC1Q9NRG1 225 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 RPRMQ9NS64 109 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 TMEM106BQ9NUM4 274 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 DEC1Q9P2X7 70 aa9.12□□□□□ -0.95
ABCF1-205ENST00000475993 SHISA7A6NL88 538 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 VSTM5A8MXK1 200 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 IL11P20809 199 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 LGALS7P47929 136 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 ZNF133P52736 654 aaPredicted RBP9.11□□□□□ -0.95
ABCF1-205ENST00000475993 RRADP55042 308 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 RPL23P62829 140 aaKnown RBP9.11□□□□□ -0.95
ABCF1-205ENST00000475993 EXT1Q16394 746 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 DMRTC1Q5HYR2 192 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 CXorf66Q5JRM2 361 aaPredicted RBP9.11□□□□□ -0.95
ABCF1-205ENST00000475993 C9orf50Q5SZB4 431 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 OR2T10Q8NGZ9 312 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 FGF14Q92915 247 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 TMEM186Q96B77 213 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 RASL10BQ96S79 203 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 REPIN1Q9BWE0 567 aaKnown RBP9.11□□□□□ -0.95
ABCF1-205ENST00000475993 FBRSQ9HAH7 460 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 CEBPZOSA8MTT3 80 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 NPIPA5E9PKD4 350 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 KBTBD11O94819 623 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 NUDT14O95848 222 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 DAP3P51398 398 aaKnown RBP9.11□□□□□ -0.95
ABCF1-205ENST00000475993 PRRX1P54821 245 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 ZNF121P58317 390 aaPredicted RBP9.11□□□□□ -0.95
ABCF1-205ENST00000475993 ZNF154Q13106 437 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 ACSF3Q4G176 576 aaPredicted RBP9.11□□□□□ -0.95
ABCF1-205ENST00000475993 DOK3Q7L591 496 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 ZNF703Q9H7S9 590 aaPredicted RBP9.11□□□□□ -0.95
ABCF1-205ENST00000475993 BET1LQ9NYM9 111 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 TBX21Q9UL17 535 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 NPIPA1Q9UND3 350 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 XIRP2A4UGR9 3374 aa9.11□□□□□ -0.95
ABCF1-205ENST00000475993 OTOL1A6NHN0 477 aaPredicted RBP9.1□□□□□ -0.95
ABCF1-205ENST00000475993 DDAH2O95865 285 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 FAHP16930 419 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 PGCP20142 388 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 CDKN1AP38936 164 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 UBE2NP61088 152 aaKnown RBP9.1□□□□□ -0.95
ABCF1-205ENST00000475993 SRPXP78539 464 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 ZP4Q12836 540 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 GPM6BQ13491 265 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 OR4A47Q6IF82 309 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 LCN15Q6UWW0 184 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 DEFB128Q7Z7B8 93 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 CCDC71LQ8N9Z2 235 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 SPIN2AQ99865 258 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 SPIN2BQ9BPZ2 258 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 OR51I2Q9H344 312 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 RYDENQ9NUL5 291 aaKnown RBP9.1□□□□□ -0.95
ABCF1-205ENST00000475993 LHFPL6Q9Y693 200 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 CLEC18AA5D8T8 446 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 LILRA1O75019 489 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 OPRM1P35372 400 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 SRP14P37108 136 aaKnown RBP9.1□□□□□ -0.95
ABCF1-205ENST00000475993 RPL15P61313 204 aaKnown RBP9.1□□□□□ -0.95
ABCF1-205ENST00000475993 ID3Q02535 119 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 TLE3Q04726 772 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 RBPJQ06330 500 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 CST6Q15828 149 aa9.1□□□□□ -0.95
ABCF1-205ENST00000475993 KIAA2026Q5HYC2 2103 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms