RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 CTDSP2O14595 271 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 XRCC3O43542 346 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 CLPXO76031 633 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 FSHBP01225 129 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 CD3GP09693 182 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 RCC1P18754 421 aaPredicted RBP18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 PRTN3P24158 256 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 ERVFRD-1P60508 538 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 ZNF880Q6PDB4 577 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 MCFD2Q8NI22 146 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 LINC00574Q9H8X3 128 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 BATF3Q9NR55 127 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 SIRT7Q9NRC8 400 aa18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 ELF5Q9UKW6 265 aaPredicted RBP18.17■□□□□ 0.5
MCF2L2-209ENST00000475664 TMEM235A6NFC5 223 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 GZMHP20718 246 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 SSTR5P35346 364 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 DLX1P56177 255 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 C6orf183Q5T699 404 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 HACD4Q5VWC8 232 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 HEPN1Q6WQI6 88 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 LAX1Q8IWV1 398 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 IZUMO1Q8IYV9 350 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 DTX3Q8N9I9 347 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 TNFRSF14Q92956 283 aa18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 CHMP1AQ9HD42 196 aaPredicted RBP18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 NSD1Q96L73 2696 aaPredicted RBP18.16■□□□□ 0.5
MCF2L2-209ENST00000475664 TEP1Q99973 2627 aaKnown RBP18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 POM121CA8CG34 1229 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 C12orf77C9JDV5 145 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 INAFM1C9JVW0 142 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 NPIPB11E5RHQ5 1161 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 C15orf65H3BRN8 121 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 RGS5O15539 181 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 ORC5O43913 435 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 MMP23AO75900 390 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 MELTFP08582 738 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 IGHV1-8P0DP01 117 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 ARFRP1Q13795 201 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 PNLIPRP3Q17RR3 467 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 KLF17Q5JT82 389 aaPredicted RBP18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 TMEM69Q5SWH9 247 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 PRAMEF5Q5TYX0 476 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 TRAT1Q6PIZ9 186 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 IL17RELQ6ZVW7 336 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 MOB1BQ7L9L4 216 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 ZNF554Q86TJ5 538 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 TEX29Q8N6K0 151 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 C6orf62Q9GZU0 229 aaPredicted RBP18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 AUNIPQ9H7T9 357 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 A3GALT2U3KPV4 340 aa18.15■□□□□ 0.5
MCF2L2-209ENST00000475664 TRAV40A0A0B4J280 105 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 FAM25AB3EWG3 89 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 FAM25CB3EWG5 89 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 FAM25GB3EWG6 89 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 HOXB4P17483 251 aaPredicted RBP18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 HNF1AP20823 631 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 GDNFP39905 211 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 TAS2R20P59543 309 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 MRPS15P82914 257 aaKnown RBP18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 PRB3Q04118 309 aaPredicted RBP18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 ZNF782Q6ZMW2 699 aaPredicted RBP18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 Q9N2K0 584 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 SESN1Q9Y6P5 492 aa18.14■□□□□ 0.49
MCF2L2-209ENST00000475664 RNASEK-C17orf49H0YIS7 233 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 FCGR3AP08637 254 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 OMGP23515 440 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 HMGN3Q15651 99 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 NCR3LG1Q68D85 454 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 HCP5Q6MZN7 132 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 NANPQ8TBE9 248 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 SETD6Q8TBK2 473 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 NUDCD2Q8WVJ2 157 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 LHX4Q969G2 390 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 ARL11Q969Q4 196 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 KIRREL1Q96J84 757 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 MMP27Q9H306 513 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 TAF9BQ9HBM6 251 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 IDI2-AS1Q9NZ38 188 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 EXTL2Q9UBQ6 330 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 ADAM30Q9UKF2 790 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 CDC42EP3Q9UKI2 254 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 MTORP42345 2549 aa18.13■□□□□ 0.49
MCF2L2-209ENST00000475664 FN1P02751 2386 aaKnown RBP18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 CENPVL3A0A0U1RRI6 287 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 SSX5O60225 188 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 IGHV4-38-2P0DP08 117 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 PTHLHP12272 177 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 GNG2P59768 71 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 PITPNAQ00169 270 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 KLRD1Q13241 179 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 CNIH2Q6PI25 160 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 OR10A7Q8NGE5 316 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 RFESDQ8TAC1 157 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 UBALD1Q8TB05 177 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 KCNIP1Q9NZI2 227 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 MGAT4AQ9UM21 535 aa18.12■□□□□ 0.49
MCF2L2-209ENST00000475664 F2RL2O00254 374 aa18.11■□□□□ 0.49
MCF2L2-209ENST00000475664 SPINT2O43291 252 aa18.11■□□□□ 0.49
MCF2L2-209ENST00000475664 HLA-DQB1P01920 261 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms