RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 RNF144BQ7Z419 303 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 GAPTQ8N292 157 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 CENPSQ8N2Z9 138 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 BPIFB2Q8N4F0 458 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 GCSAMQ8N6F7 178 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 DTX3Q8N9I9 347 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 OR4A4PQ8NGN8 299 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 TERB2Q8NHR7 220 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 ZFAND1Q8TCF1 268 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 GIMAP1Q8WWP7 306 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 CCL17Q92583 94 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 SNAPC3Q92966 411 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 PPP1R14BQ96C90 147 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 RAB39BQ96DA2 213 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 FAHD2AQ96GK7 314 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 VRK1Q99986 396 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-207ENST00000475558 MARVELD1Q9BSK0 173 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 TRAF4Q9BUZ4 470 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-207ENST00000475558 C11orf54Q9H0W9 315 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-207ENST00000475558 GHITMQ9H3K2 345 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 ZMAT3Q9HA38 289 aaKnown RBP5.88□□□□□ -1.47
SHQ1-207ENST00000475558 TMEM165Q9HC07 324 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 GPN1Q9HCN4 374 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-207ENST00000475558 MCUBQ9NWR8 336 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 MIOXQ9UGB7 285 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 AK3Q9UIJ7 227 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 TBC1D24Q9ULP9 559 aa5.88□□□□□ -1.47
SHQ1-207ENST00000475558 TRAV24A0A0B4J272 114 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 MEIOCA2RUB1 952 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 INMT-MINDY4F8WBC2 141 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 SLC33A1O00400 549 aaPredicted RBP5.87□□□□□ -1.47
SHQ1-207ENST00000475558 SPINT2O43291 252 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 NDUFB3O43676 98 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 LANCL1O43813 399 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 CD5LO43866 347 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 PLAUP00749 431 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 MT-ND4P03905 459 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 TCRBP04435 133 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 IL5P05113 134 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 H2AFB2P0C5Z0 115 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 GABRA2P47869 451 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 EFNA4P52798 201 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 UCP3P55916 312 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 IL13RA1P78552 427 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 CLEC12BQ2HXU8 276 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 CR1LQ2VPA4 569 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 TMEM155Q4W5P6 130 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 LRRC10Q5BKY1 277 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 TMEM255AQ5JRV8 349 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF880Q6PDB4 577 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF497Q6ZNH5 498 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF826PQ6ZT77 177 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 OVCH2Q7RTZ1 564 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 NRARPQ7Z6K4 114 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 ZDHHC22Q8N966 263 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 OR10A7Q8NGE5 316 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 ANGPTL6Q8NI99 470 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 CORO2AQ92828 525 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 DVL3Q92997 716 aaPredicted RBP5.87□□□□□ -1.47
SHQ1-207ENST00000475558 GALMQ96C23 342 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 SULT4A1Q9BR01 284 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 REG4Q9BYZ8 158 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 PPA2Q9H2U2 334 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 CHODLQ9H9P2 273 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 Q9N2K0 584 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 YAE1D1Q9NRH1 226 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 TRAPPC2LQ9UL33 140 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 KCNIP3Q9Y2W7 256 aa5.87□□□□□ -1.47
SHQ1-207ENST00000475558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.86□□□□□ -1.472e-8■■■■■ 31.6
SHQ1-207ENST00000475558 LINC00854A0A1B0GVQ3 168 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 hCG_1809904A0A1W2PP81 198 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 A0A1W2PPE2 198 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 A0A1W2PR64 198 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 A0A1W2PRV1 198 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 hADV38S2A0JD32 116 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 UBE2QL1A1L167 161 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 CEACAM18A8MTB9 384 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 SNRPGP15A8MWD9 76 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 F8VVB4 439 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 F8VWA3 439 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 NDUFS8O00217 210 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 SIGLEC5O15389 551 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 PHF1O43189 567 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-207ENST00000475558 SSX5O60225 188 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 B3GALNT1O75752 331 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 RGS11O94810 467 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 NDUFB6O95139 128 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 CD3DP04234 171 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 AMY2AP04746 511 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 FCGR3AP08637 254 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 OR5H8P0DN80 308 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 CD33P20138 364 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 ZBTB25P24278 435 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 GIFP27352 417 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 HLA-DMAP28067 261 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 MECP2P51608 486 aaKnown RBP5.86□□□□□ -1.47
SHQ1-207ENST00000475558 TAS2R31P59538 309 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 HTD2P86397 168 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 COL10A1Q03692 680 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 Q3ZCU0 254 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms