RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 COL8A1P27658 744 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 PEBP1P30086 187 aaKnown RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 C10orf111Q8N326 155 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 LOC389332A0A1B0GUA5 103 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 MFNGO00587 321 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 LIFP15018 202 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 CEBPDP49716 269 aaPredicted RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 COL10A1Q03692 680 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 SLC26A10Q8NG04 563 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 RPS4Y2Q8TD47 263 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 Q8WTZ3 238 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 ZNF385AQ96PM9 386 aaKnown RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 CLN8Q9UBY8 286 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 C16orf97H3BN30 126 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 TMEM52Q8NDY8 209 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 ADTRPQ96IZ2 230 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 LPAR3Q9UBY5 353 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 SIGLEC14Q08ET2 396 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 ATP6V1FQ16864 119 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 FAHD2BQ6P2I3 314 aaPredicted RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 OR2D3Q8NGH3 330 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 VSTM2AQ8TAG5 236 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 FAHD2AQ96GK7 314 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 KCNMB2Q9Y691 235 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 PSG2P11465 335 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 NPY1RP25929 384 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 OGG1O15527 345 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 FAM157CP0CG43 387 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 WDFY2Q96P53 400 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 LRRC3BQ96PB8 259 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 TMEM38BQ9NVV0 291 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 TECRQ9NZ01 308 aaKnown RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 SLC25A10Q9UBX3 287 aaPredicted RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 OR2T8A6NH00 312 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 RPL29P47914 159 aaKnown RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 DTD1Q8TEA8 209 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 ADAT3Q96EY9 351 aaPredicted RBP9.6□□□□□ -0.87
VAPB-204ENST00000475243 POM121Q96HA1 1249 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 LPAR5Q9H1C0 372 aa9.6□□□□□ -0.87
VAPB-204ENST00000475243 NKX2-6A6NCS4 301 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 CGB1A6NKQ9 187 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 CDK2AP1O14519 115 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 ADRA2AP08913 450 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 TMEM183BQ1AE95 376 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 ASCL5Q7RTU5 278 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 SF3B5Q9BWJ5 86 aaKnown RBP9.59□□□□□ -0.87
VAPB-204ENST00000475243 RGS13O14921 159 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 P01737 135 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 TFPI2P48307 235 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 DCAF10Q5QP82 559 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 PRSS42Q7Z5A4 293 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 GSX1Q9H4S2 264 aaPredicted RBP9.59□□□□□ -0.87
VAPB-204ENST00000475243 RNF122Q9H9V4 155 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 IGF2P01344 180 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 C1QCP02747 245 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 CD1BP29016 333 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 IL24Q13007 206 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 LSMEM1Q8N8F7 131 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 OR1L6Q8NGR2 347 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 DUSP15Q9H1R2 295 aaPredicted RBP9.59□□□□□ -0.87
VAPB-204ENST00000475243 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 C1RLQ9NZP8 487 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 LRP5O75197 1615 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 TRBV23-1A0A0A0MS06 115 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 CENPVL1A0A0U1RR11 272 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 MRPL54Q6P161 138 aaKnown RBP9.59□□□□□ -0.87
VAPB-204ENST00000475243 PRNTQ86SH4 94 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 RGP1Q92546 391 aaPredicted RBP9.59□□□□□ -0.87
VAPB-204ENST00000475243 PTPRFP10586 1907 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 A0A1W2PQD3 144 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 CTSDP07339 412 aaPredicted RBP9.59□□□□□ -0.87
VAPB-204ENST00000475243 RPL31P62899 125 aaKnown RBP9.59□□□□□ -0.87
VAPB-204ENST00000475243 IGHV3-72A0A0B4J1Y9 119 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 C9orf172C9J069 976 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 MELTFP08582 738 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 GGTLC2Q14390 218 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 MMDQ15546 238 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 C10orf113Q5VZT2 155 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 MRPL24Q96A35 216 aaKnown RBP9.59□□□□□ -0.87
VAPB-204ENST00000475243 TTTY12Q9BZ98 90 aa9.59□□□□□ -0.87
VAPB-204ENST00000475243 GZMHP20718 246 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 ZNF137PP52743 207 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 SCGB1D4Q6XE38 83 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 OR10G8Q8NGN5 311 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 OR10C1Q96KK4 312 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 SOSTQ9BQB4 213 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 MANBALQ9NQG1 85 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 COLQQ9Y215 455 aaPredicted RBP9.58□□□□□ -0.88
VAPB-204ENST00000475243 PPP1CCP36873 323 aaKnown RBP9.58□□□□□ -0.88
VAPB-204ENST00000475243 FBXW9Q5XUX1 488 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 CLDN14O95500 239 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 LRRC75AQ8NAA5 344 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 SCMH1Q96GD3 660 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 CEP250Q9BV73 2442 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 B2MP61769 119 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 HLA-DRB3P79483 266 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 OR8A1Q8NGG7 326 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms