RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TMEM30CPA0ZSE6 113 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 J3QR06 171 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 GPX5O75715 221 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 CD28P10747 220 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 MAPK3P27361 379 aaPredicted RBP7.55□□□□□ -1.2
PDPN-204ENST00000475043 VDAC2P45880 294 aaPredicted RBP7.55□□□□□ -1.2
PDPN-204ENST00000475043 NSUN5P1Q3KNT7 163 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 TMEM95Q3KNT9 176 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 AWAT2Q6E213 333 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 Q8N2B8 174 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 CCDC107Q8WV48 283 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 THRSPQ92748 146 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 MYDGFQ969H8 173 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 RPEQ96AT9 228 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 SSBP4Q9BWG4 385 aaPredicted RBP7.55□□□□□ -1.2
PDPN-204ENST00000475043 MND1Q9BWT6 205 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 BANF2Q9H503 90 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 IFT22Q9H7X7 185 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 SCN3BQ9NY72 215 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 PSG11Q9UQ72 335 aa7.55□□□□□ -1.2
PDPN-204ENST00000475043 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 A0A1W2PPE3 182 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 OOSP1A8MZH6 123 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 MCRIP1C9JLW8 97 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 NPIPB11E5RHQ5 1161 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 LY6LH3BQJ8 138 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 AIPO00170 330 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 CRTAPO75718 401 aaPredicted RBP7.54□□□□□ -1.2
PDPN-204ENST00000475043 CD1AP06126 327 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 CDK1P06493 297 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 FAM106CPP0CH98 169 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 GZMHP20718 246 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 AQP4P55087 323 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 PAX5Q02548 391 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 GABPB1Q06547 395 aaPredicted RBP7.54□□□□□ -1.2
PDPN-204ENST00000475043 MADCAM1Q13477 382 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 MED22Q15528 200 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 ABCA11PQ4W5N1 156 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 C9orf152Q5JTZ5 239 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 C6orf141Q5SZD1 244 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 C16orf82Q7Z2V1 217 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 NKAIN3Q8N8D7 197 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 OR10X1Q8NGY0 326 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 UBALD1Q8TB05 177 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 ARL11Q969Q4 196 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 MRPS24Q96EL2 167 aaKnown RBP7.54□□□□□ -1.2
PDPN-204ENST00000475043 TMED9Q9BVK6 235 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 SELENOIQ9C0D9 397 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 SPACA1Q9HBV2 294 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 FKBP14Q9NWM8 211 aa7.54□□□□□ -1.2
PDPN-204ENST00000475043 SH2D7A6NKC9 451 aaPredicted RBP7.53□□□□□ -1.2
PDPN-204ENST00000475043 SDCBPO00560 298 aaPredicted RBP7.53□□□□□ -1.2
PDPN-204ENST00000475043 PIN1P1O15428 100 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 OR2F2O95006 317 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 LPLP06858 475 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 MGMTP16455 207 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 GPR50Q13585 617 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 HES1Q14469 280 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 INSL4Q14641 139 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 SPHARQ15513 63 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 ACSM3Q53FZ2 586 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 RAB12Q6IQ22 244 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 SLC16A12Q6ZSM3 486 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 CENPVQ7Z7K6 275 aaPredicted RBP7.53□□□□□ -1.2
PDPN-204ENST00000475043 CDH26Q8IXH8 852 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 PRR18Q8N4B5 295 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 TMEM104Q8NE00 496 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 OR5AU1Q8NGC0 362 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 OR10A7Q8NGE5 316 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 OR56B4Q8NH76 319 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 NRG4Q8WWG1 115 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 FAM46BQ96A09 425 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 RBM14Q96PK6 669 aaKnown RBP7.53□□□□□ -1.2
PDPN-204ENST00000475043 CITED2Q99967 270 aaPredicted RBP7.53□□□□□ -1.2
PDPN-204ENST00000475043 LINC00574Q9H8X3 128 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 ETAA1Q9NY74 926 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 TRAPPC2LQ9UL33 140 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 PEX16Q9Y5Y5 336 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
PDPN-204ENST00000475043 IGHV3-43A0A0B4J1X8 118 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 A0A1W2PRX2 142 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 UBE2QL1A1L167 161 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 ERICH4A6NGS2 130 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 H0YHG0 523 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 MT-ND4P03905 459 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 OPN1MWP04001 364 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 SNRNP70P08621 437 aaKnown RBP7.52□□□□□ -1.21
PDPN-204ENST00000475043 HSMCR30P0CW71 290 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 OPN1MW2P0DN77 364 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 OPN1MW3P0DN78 364 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 IGHV3-43DP0DP04 118 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 TMEM11P17152 192 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 VHLP40337 213 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 RAB7AP51149 207 aa7.52□□□□□ -1.21
PDPN-204ENST00000475043 EMX1Q04741 257 aaPredicted RBP7.52□□□□□ -1.21
PDPN-204ENST00000475043 DIAPH2-AS1Q14236 149 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms