RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TBC1D26Q86UD7 250 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 RPRMLQ8N4K4 120 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 CISD2Q8N5K1 135 aaKnown RBP18.38■□□□□ 0.53
CCM2-206ENST00000474617 PPP1R35Q8TAP8 253 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 MRPL24Q96A35 216 aaKnown RBP18.38■□□□□ 0.53
CCM2-206ENST00000474617 JKAMPQ9P055 326 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 PFDN2Q9UHV9 154 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 NSG2Q9Y328 171 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 UBE2J1Q9Y385 318 aaPredicted RBP18.38■□□□□ 0.53
CCM2-206ENST00000474617 ESPL1Q14674 2120 aa18.38■□□□□ 0.53
CCM2-206ENST00000474617 SHANK1Q9Y566 2161 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 MPTX1A8MV57 137 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 NMBP08949 121 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 UCP1P25874 307 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 LUMP51884 338 aaPredicted RBP18.37■□□□□ 0.53
CCM2-206ENST00000474617 ALKAL2Q6UX46 152 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 FAM71E2Q8N5Q1 922 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 ZBTB34Q8NCN2 500 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 OR5D13Q8NGL4 314 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 ERGIC1Q969X5 290 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 CITED4Q96RK1 184 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 TOLLIPQ9H0E2 274 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 PRR13Q9NZ81 148 aa18.37■□□□□ 0.53
CCM2-206ENST00000474617 OOEPA6NGQ2 149 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 RCC1P18754 421 aaPredicted RBP18.36■□□□□ 0.53
CCM2-206ENST00000474617 BMP5P22003 454 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 PTAFRP25105 342 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 GATA4P43694 442 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 S100A10P60903 97 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 COMMD7Q86VX2 200 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 ZNF695Q8IW36 515 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 OR10V1Q8NGI7 309 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 PLPPR1Q8TBJ4 325 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 DNTTIP1Q9H147 329 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 SESN1Q9Y6P5 492 aa18.36■□□□□ 0.53
CCM2-206ENST00000474617 A0A0G2JNJ9 132 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 CLEC18AA5D8T8 446 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 GPR157Q5UAW9 335 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 ZNF818PQ6ZRF7 136 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 CLEC18CQ8NCF0 446 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 OR1S1Q8NH92 325 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 TMEM171Q8WVE6 324 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 MSL2Q9HCI7 577 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 Q9UFV3 132 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 ZDHHC8Q9ULC8 765 aa18.35■□□□□ 0.53
CCM2-206ENST00000474617 APC2O95996 2303 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 RNF212BA8MTL3 300 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 SRRM5B3KS81 715 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 K7EPK0 472 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 ST8SIA3O43173 380 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 HEXAP06865 529 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 SLC25A6P12236 298 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 VDAC1P21796 283 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 CD40P25942 277 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 SP6Q3SY56 376 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 OR2Z1Q8NG97 314 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 OR11L1Q8NGX0 322 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 ANGPTL6Q8NI99 470 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 TP53RKQ96S44 253 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 DIRC2Q96SL1 478 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 NCOR1P1Q9H4R4 102 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 OR5AC2Q9NZP5 309 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 PRRC2CQ9Y520 2896 aaKnown RBP18.34■□□□□ 0.53
CCM2-206ENST00000474617 SVILO95425 2214 aa18.34■□□□□ 0.53
CCM2-206ENST00000474617 hCG_1807616A0A1W2PRN6 198 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 HSPA12AO43301 675 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 GAPDHP04406 335 aaKnown RBP18.33■□□□□ 0.53
CCM2-206ENST00000474617 TNFSF4P23510 183 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 F2RP25116 425 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 SNTB1Q13884 538 aaKnown RBP18.33■□□□□ 0.53
CCM2-206ENST00000474617 TMEM268Q5VZI3 342 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 LYZL2Q7Z4W2 148 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 BAP18Q8IXM2 172 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 RBPMSQ93062 196 aaKnown RBP18.33■□□□□ 0.53
CCM2-206ENST00000474617 GALMQ96C23 342 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 LURAP1Q96LR2 239 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 TAF9BQ9HBM6 251 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 RAB9BQ9NP90 201 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 NGBQ9NPG2 151 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 OR14J1Q9UGF5 321 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 DUSP13Q9UII6 198 aa18.33■□□□□ 0.53
CCM2-206ENST00000474617 AKAP13Q12802 2813 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 IGKV1D-13A0A0B4J2D9 117 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 PGLYRP1O75594 196 aaPredicted RBP18.33■□□□□ 0.52
CCM2-206ENST00000474617 ZNF205O95201 554 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 IGKV1-13P0DP09 117 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 MMP9P14780 707 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 P2RY1P47900 373 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 PRAMEF6Q5VXH4 476 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 EIF4E3Q8N5X7 224 aaKnown RBP18.33■□□□□ 0.52
CCM2-206ENST00000474617 SLC35G3Q8N808 338 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 LRRC29Q8WV35 223 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 SNRNP40Q96DI7 357 aaKnown RBP18.33■□□□□ 0.52
CCM2-206ENST00000474617 RRNAD1Q96FB5 475 aaKnown RBP18.33■□□□□ 0.52
CCM2-206ENST00000474617 VKORC1Q9BQB6 163 aa18.33■□□□□ 0.52
CCM2-206ENST00000474617 ERRFI1Q9UJM3 462 aaPredicted RBP18.33■□□□□ 0.52
CCM2-206ENST00000474617 VSTM5A8MXK1 200 aa18.32■□□□□ 0.52
CCM2-206ENST00000474617 PVALBP20472 110 aaPredicted RBP18.32■□□□□ 0.52
CCM2-206ENST00000474617 RPL12P30050 165 aaKnown RBP18.32■□□□□ 0.52
CCM2-206ENST00000474617 FAM27E3Q08E93 113 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms