RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SECTM1Q8WVN6 248 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 KIRREL1Q96J84 757 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 AKR1E2Q96JD6 320 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 CCL28Q9NRJ3 127 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 TAAR3PQ9P1P4 343 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 NSG2Q9Y328 171 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 POMT1Q9Y6A1 747 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 INTS1Q8N201 2190 aaKnown RBP8.28□□□□□ -1.08
USP39-214ENST00000474572 SHANK1Q9Y566 2161 aa8.28□□□□□ -1.08
USP39-214ENST00000474572 IGLV3-9A0A075B6K5 115 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 PIGBOS1A0A0B4J2F0 54 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 A8MXE2 369 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 K7ENP7 123 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 IFNL4K9M1U5 179 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 PGLYRP1O75594 196 aaPredicted RBP8.27□□□□□ -1.09
USP39-214ENST00000474572 IGHV3-13P01766 116 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 HEXAP06865 529 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 GRPP07492 148 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 GLI4P10075 376 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 RPL12P30050 165 aaKnown RBP8.27□□□□□ -1.09
USP39-214ENST00000474572 GLRXP35754 106 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 CFHR2P36980 270 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 P2RY1P47900 373 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 MSMO1Q15800 293 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 NMSQ5H8A3 153 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 FAM74A1Q5RGS3 127 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 PRAMEF6Q5VXH4 476 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 SPACA3Q8IXA5 215 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 Q8NA96 180 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 DMBX1Q8NFW5 382 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 OR10V1Q8NGI7 309 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 OR52M1Q8NGK5 317 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 OR10J5Q8NHC4 309 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 S100PBPQ96BU1 408 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 SPIN2AQ99865 258 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 SPIN2BQ9BPZ2 258 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 ARV1Q9H2C2 271 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 PIGMQ9H3S5 423 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 GLS2Q9UI32 602 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 ZDHHC8Q9ULC8 765 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 ZNF835Q9Y2P0 537 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 SESN1Q9Y6P5 492 aa8.27□□□□□ -1.09
USP39-214ENST00000474572 TMEM30CPA0ZSE6 113 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 KRBOX1C9JBD0 128 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 ST8SIA3O43173 380 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 GPR137BO60478 399 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 PSPNO60542 156 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 IGLV2-14P01704 120 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 FAM157CP0CG43 387 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 SLC25A6P12236 298 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 VDAC1P21796 283 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 F2RP25116 425 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 FABP6P51161 128 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 TESK1Q15569 626 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 GPR157Q5UAW9 335 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 ZNF826PQ6ZT77 177 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 FAM90A1Q86YD7 464 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 CMTM1Q8IZ96 169 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 RNF141Q8WVD5 230 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 ABHD17AQ96GS6 310 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 LINC00052Q96N35 136 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 FBXL17Q9UF56 701 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 NUP50Q9UKX7 468 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 TRAPPC2LQ9UL33 140 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 TP53TG5Q9Y2B4 290 aa8.26□□□□□ -1.09
USP39-214ENST00000474572 RCL1Q9Y2P8 373 aaKnown RBP8.26□□□□□ -1.09
USP39-214ENST00000474572 UBE2J1Q9Y385 318 aaPredicted RBP8.26□□□□□ -1.09
USP39-214ENST00000474572 LSM5Q9Y4Y9 91 aaKnown RBP8.26□□□□□ -1.09
USP39-214ENST00000474572 RAB19A4D1S5 217 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 NKX2-6A6NCS4 301 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 NUDT19A8MXV4 375 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 SRRM5B3KS81 715 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 HSD17B6O14756 317 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 WNT9BO14905 357 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 MMP9P14780 707 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 S100GP29377 79 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 CCKARP32238 428 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 OR3A1P47881 315 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 CEBPDP49716 269 aaPredicted RBP8.25□□□□□ -1.09
USP39-214ENST00000474572 ZNF83P51522 516 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 FOXC1Q12948 553 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 TBR1Q16650 682 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 RPL7L1Q6DKI1 246 aaKnown RBP8.25□□□□□ -1.09
USP39-214ENST00000474572 MEX3BQ6ZN04 569 aaKnown RBP8.25□□□□□ -1.09
USP39-214ENST00000474572 MRGPRGQ86SM5 289 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 ZNF695Q8IW36 515 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 FAM219AQ8IW50 185 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 UBAC2Q8NBM4 344 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 COQ2Q96H96 371 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 TAF9BQ9HBM6 251 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 MSL2Q9HCI7 577 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 LUZP4Q9P127 313 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 ERRFI1Q9UJM3 462 aaPredicted RBP8.25□□□□□ -1.09
USP39-214ENST00000474572 SPEF1Q9Y4P9 236 aa8.25□□□□□ -1.09
USP39-214ENST00000474572 ZNF292O60281 2723 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 EP300Q09472 2414 aaPredicted RBP8.24□□□□□ -1.09
USP39-214ENST00000474572 OOEPA6NGQ2 149 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 ZSCAN5BA6NJL1 495 aa8.24□□□□□ -1.09
USP39-214ENST00000474572 A6NLC8 198 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms