RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 Q6ZS49 121 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 TPRX1Q8N7U7 411 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 OR51S1Q8NGJ8 323 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 OR56B4Q8NH76 319 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 SNAPC3Q92966 411 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 ARL11Q969Q4 196 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 KIRREL1Q96J84 757 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 LURAP1Q96LR2 239 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 GSX2Q9BZM3 304 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 TAF9BQ9HBM6 251 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF69Q9UC07 566 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 ANAPC10Q9UM13 185 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 MAB21L2Q9Y586 359 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 NUBP2Q9Y5Y2 271 aa8.56□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF729A6NN14 1252 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 SDCBPO00560 298 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 DHFRP00374 187 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 CD74P04233 296 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 RLN1P04808 185 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 SELLP14151 372 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 RCC1P18754 421 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 ZBTB25P24278 435 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 RBMXP38159 391 aaKnown RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 RFX2P48378 723 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 PAX5Q02548 391 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 TMEM30BQ3MIR4 351 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 LYPD2Q6UXB3 125 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 NRARPQ7Z6K4 114 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 CENPSQ8N2Z9 138 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 CHPT1Q8WUD6 406 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 COQ2Q96H96 371 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 SLC25A21Q9BQT8 299 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF2Q9BSG1 426 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 SSBP3Q9BWW4 388 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 TINAGL1Q9GZM7 467 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 NCOR1P1Q9H4R4 102 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 GNG12Q9UBI6 72 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 SLC23A1Q9UHI7 598 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 OPN4Q9UHM6 478 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 C14orf166Q9Y224 244 aaKnown RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 UBE2J1Q9Y385 318 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 LINC00312Q9Y6C7 94 aa8.55□□□□□ -1.04
PRPF38A-202ENST00000474048 PLA2G10O15496 165 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 TCRBP04435 133 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 GSTT2P0CG29 244 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 SLC25A16P16260 332 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 SLC6A1P30531 599 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 CCR6P51684 374 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 FXYD4P59646 89 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 HMGN3Q15651 99 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 ABCA11PQ4W5N1 156 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 LPCAT3Q6P1A2 487 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 ZFAND1Q8TCF1 268 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 TOMM40LQ969M1 308 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 CREB3L1Q96BA8 519 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF714Q96N38 554 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 SLC6A7Q99884 636 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 BPESC1Q9GZL8 116 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 SHARPINQ9H0F6 387 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 C20orf85Q9H1P6 137 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 LIME1Q9H400 295 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 PATZ1Q9HBE1 687 aaKnown RBP8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 MBNL3Q9NUK0 354 aaKnown RBP8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 NUDT15Q9NV35 164 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 CALYQ9NYX4 217 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 KCNS2Q9ULS6 477 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 FLNCQ14315 2725 aa8.54□□□□□ -1.04
PRPF38A-202ENST00000474048 TRAV6A0A075B6T7 132 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 TRAV39A0A0B4J263 110 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 A0A1B0GW55 424 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 C12orf77C9JDV5 145 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 NDUFB6O95139 128 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 HBZP02008 142 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 SCTP09683 121 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DUX4L2P0CJ85 424 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DUX4L3P0CJ86 424 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DUX4L4P0CJ87 422 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DUX4L5P0CJ88 424 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DUX4L6P0CJ89 424 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DUX4L7P0CJ90 424 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 FCGR2CP31995 323 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 TAS2R31P59538 309 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 LTC4SQ16873 150 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 CLEC12BQ2HXU8 276 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DEFB113Q30KQ7 82 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 ZNF880Q6PDB4 577 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DUX4L9Q6RFH8 374 aaPredicted RBP8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 CCBE1Q6UXH8 406 aaPredicted RBP8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 OVCH2Q7RTZ1 564 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 TMED4Q7Z7H5 227 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 LRRC75A-AS1Q8N1F1 130 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 GAPTQ8N292 157 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 OR4D10Q8NGI6 311 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 OR13A1Q8NGR1 328 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 TERB2Q8NHR7 220 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 EDARADDQ8WWZ3 215 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 NRGNQ92686 78 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms