RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ZNF506Q5JVG8 444 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 Q6ZS49 121 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 CMTM1Q8IZ96 169 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 CLDND2Q8NHS1 167 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 KCNE4Q8WWG9 221 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 SPSB4Q96A44 273 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 ABHD14BQ96IU4 210 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 CLEC18AA5D8T8 446 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 SLC34A2O95436 690 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 HSPB1P04792 205 aaKnown RBP18.06■□□□□ 0.48
COL18A1-207ENST00000473212 BAXQ07812 192 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 LPAL2Q16609 132 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 CLEC18CQ8NCF0 446 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 NIPSNAP3BQ9BS92 247 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 PRDM6Q9NQX0 595 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 DOK5Q9P104 306 aa18.06■□□□□ 0.48
COL18A1-207ENST00000473212 TGIF2-C20orf24A0A0A6YYL0 155 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 IGKV1-6A0A0C4DH72 117 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 H3BP45 60 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 NGFP01138 241 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 PAX9P55771 341 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 RPL23AP62750 156 aaKnown RBP18.05■□□□□ 0.48
COL18A1-207ENST00000473212 ARF1P84077 181 aaKnown RBP18.05■□□□□ 0.48
COL18A1-207ENST00000473212 IZUMO4Q1ZYL8 232 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 TIPARPQ7Z3E1 657 aaKnown RBP18.05■□□□□ 0.48
COL18A1-207ENST00000473212 TMEM105Q8N8V8 129 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 Q8NFD4 153 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 TVP23CQ96ET8 276 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 MED13Q9UHV7 2174 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 A0A087WWC5 75 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 LILRA1O75019 489 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 CDX1P47902 265 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-207ENST00000473212 PRDX4Q13162 271 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 RIPPLY2Q5TAB7 128 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 ATP5SQ99766 215 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 OR51B6Q9H340 312 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 MTCH1Q9NZJ7 389 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 TAAR3PQ9P1P4 343 aa18.05■□□□□ 0.48
COL18A1-207ENST00000473212 C5orf49A4QMS7 147 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 TUSC2O75896 110 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 TLE4Q04727 773 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FOXO1Q12778 655 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 C20orf204Q6ZNR8 217 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 PRDM14Q9GZV8 571 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 CALHM2Q9HA72 323 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 TCFL5Q9UL49 500 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 RNF115Q9Y4L5 304 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A10PA6NDY2 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A18PA6NE21 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A16PA6NEW6 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A20PA6NIJ5 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A8PA6NJQ4 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A7PA6NKC0 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A22PA8MWA6 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A12PA8MX19 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A5PA8MXJ8 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A23PA8MXZ1 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 SYNGR1O43759 233 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A15PP0C7V4 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A13PP0C7W8 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A14PP0C7W9 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FAM90A24PP0C7X0 464 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 FGF12P61328 243 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 ZNF610Q8N9Z0 462 aa18.04■□□□□ 0.48
COL18A1-207ENST00000473212 A0A0G2JRQ6 117 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 DUXBA0A1W2PPF3 345 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 CEACAM1P13688 526 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 PYY3Q5JQD4 70 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 MYPOPQ86VE0 399 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-207ENST00000473212 THNSL2Q86YJ6 484 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 RBMXL1Q96E39 390 aaKnown RBP18.03■□□□□ 0.48
COL18A1-207ENST00000473212 ZNF552Q9H707 407 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-207ENST00000473212 NOSIPQ9Y314 301 aaKnown RBP18.03■□□□□ 0.48
COL18A1-207ENST00000473212 SPENQ96T58 3664 aaKnown RBP18.03■□□□□ 0.48
COL18A1-207ENST00000473212 PGLYRP1O75594 196 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-207ENST00000473212 MMP9P14780 707 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 GFRA1P56159 465 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 TAS2R30P59541 319 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 KIAA2026Q5HYC2 2103 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 LINC00469Q8N7U9 141 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 OR5D13Q8NGL4 314 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 PRO3102Q9H379 93 aa18.03■□□□□ 0.48
COL18A1-207ENST00000473212 MED12LQ86YW9 2145 aa18.02■□□□□ 0.48
COL18A1-207ENST00000473212 CYB5BO43169 146 aa18.02■□□□□ 0.48
COL18A1-207ENST00000473212 CYTIPO60759 359 aa18.02■□□□□ 0.48
COL18A1-207ENST00000473212 IL24Q13007 206 aa18.02■□□□□ 0.48
COL18A1-207ENST00000473212 SRSF7Q16629 238 aaKnown RBP eCLIP18.02■□□□□ 0.48
COL18A1-207ENST00000473212 SPNS3Q6ZMD2 512 aa18.02■□□□□ 0.48
COL18A1-207ENST00000473212 TUSC5Q8IXB3 177 aa18.02■□□□□ 0.48
COL18A1-207ENST00000473212 PSMF1Q92530 271 aa18.02■□□□□ 0.48
COL18A1-207ENST00000473212 DSPP15924 2871 aaKnown RBP18.02■□□□□ 0.47
COL18A1-207ENST00000473212 TRAV39A0A0B4J263 110 aa18.02■□□□□ 0.47
COL18A1-207ENST00000473212 H0Y980 276 aa18.02■□□□□ 0.47
COL18A1-207ENST00000473212 GLIPR1P48060 266 aa18.02■□□□□ 0.47
COL18A1-207ENST00000473212 TMEM267Q0VDI3 215 aaPredicted RBP18.02■□□□□ 0.47
COL18A1-207ENST00000473212 COLCA1Q6ZS62 124 aa18.02■□□□□ 0.47
COL18A1-207ENST00000473212 C17orf78Q8N4C9 275 aa18.02■□□□□ 0.47
COL18A1-207ENST00000473212 POM121Q96HA1 1249 aa18.02■□□□□ 0.47
COL18A1-207ENST00000473212 GNG13Q9P2W3 67 aa18.02■□□□□ 0.47
COL18A1-207ENST00000473212 ATP23Q9Y6H3 246 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms