RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 TRAV40A0A0B4J280 105 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 FAM25AB3EWG3 89 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 FAM25CB3EWG5 89 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 FAM25GB3EWG6 89 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 XRCC3O43542 346 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 ORC5O43913 435 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 HPGDSO60760 199 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 CRLF1O75462 422 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 EIF4EP06730 217 aaKnown RBP11.53□□□□□ -0.56
SSR4-207ENST00000471724 GNB3P16520 340 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 PRTN3P24158 256 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 TALDO1P37837 337 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 MNDAP41218 407 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 GUCA2AQ02747 115 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 SCGB2A2Q13296 93 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 PNLIPRP3Q17RR3 467 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 OR52W1Q6IF63 320 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 HEPN1Q6WQI6 88 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 Q8N7P7 452 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 OR4K15Q8NH41 348 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 NANPQ8TBE9 248 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 MRPL30Q8TCC3 161 aaKnown RBP11.53□□□□□ -0.56
SSR4-207ENST00000471724 MRGPRDQ8TDS7 321 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 TBX15Q96SF7 602 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 C6orf62Q9GZU0 229 aaPredicted RBP11.53□□□□□ -0.56
SSR4-207ENST00000471724 SIRT7Q9NRC8 400 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 MBNL3Q9NUK0 354 aaKnown RBP11.53□□□□□ -0.56
SSR4-207ENST00000471724 A3GALT2U3KPV4 340 aa11.53□□□□□ -0.56
SSR4-207ENST00000471724 SONP18583 2426 aaKnown RBP11.52□□□□□ -0.56
SSR4-207ENST00000471724 FN1P02751 2386 aaKnown RBP11.52□□□□□ -0.57
SSR4-207ENST00000471724 TRAV18A0A075B6X5 111 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 KBTBD11-OT1A0A1B0GTJ5 212 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 MEX3AA1L020 520 aaKnown RBP11.52□□□□□ -0.57
SSR4-207ENST00000471724 SPINT2O43291 252 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 IGHV1-8P0DP01 117 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 SSTR5P35346 364 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 GNG2P59768 71 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 ZNF260Q3ZCT1 412 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 CDNFQ49AH0 187 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 GPR157Q5UAW9 335 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 HACD4Q5VWC8 232 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 FOXB2Q5VYV0 432 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 RTN4RL2Q86UN3 420 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 OR10A7Q8NGE5 316 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 CCDC107Q8WV48 283 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 HEXA-AS1Q9H8Q6 139 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 LINC00574Q9H8X3 128 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 ZMAT3Q9HA38 289 aaKnown RBP11.52□□□□□ -0.57
SSR4-207ENST00000471724 KCNK7Q9Y2U2 307 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 SESN1Q9Y6P5 492 aa11.52□□□□□ -0.57
SSR4-207ENST00000471724 NSD1Q96L73 2696 aaPredicted RBP11.52□□□□□ -0.57
SSR4-207ENST00000471724 TMEM235A6NFC5 223 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 A6NHS1 94 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 TPPPO94811 219 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 FSHBP01225 129 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 FCGR3AP08637 254 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 ELK1P19419 428 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 DTYMKP23919 212 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
SSR4-207ENST00000471724 TAS2R20P59543 309 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 BPIFB3P59826 476 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 C17orf58Q2M2W7 97 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 CHRFAM7AQ494W8 412 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 PRAMEF5Q5TYX0 476 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 OLFML2AQ68BL7 652 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 BAIAP2L2Q6UXY1 529 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 C1orf229Q6ZS94 237 aaPredicted RBP11.51□□□□□ -0.57
SSR4-207ENST00000471724 LAX1Q8IWV1 398 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 OR13D1Q8NGV5 346 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 SETD6Q8TBK2 473 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 C15orf40Q8WUR7 153 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 ARL11Q969Q4 196 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 HDHD3Q9BSH5 251 aaPredicted RBP11.51□□□□□ -0.57
SSR4-207ENST00000471724 BEX2Q9BXY8 128 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 NXF2Q9GZY0 626 aaKnown RBP11.51□□□□□ -0.57
SSR4-207ENST00000471724 MMP27Q9H306 513 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 NAV3Q8IVL0 2385 aa11.51□□□□□ -0.57
SSR4-207ENST00000471724 C12orf77C9JDV5 145 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 NPIPB11E5RHQ5 1161 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 AVPP01185 164 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 CGB3P0DN86 165 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 CGB7P0DN87 165 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 RCC1P18754 421 aaPredicted RBP11.5□□□□□ -0.57
SSR4-207ENST00000471724 FPR2P25090 351 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 S100A5P33763 92 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 KIR2DS4P43632 304 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 HLA-DRB3P79483 266 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 KIR2DS1Q14954 304 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 HMGN3Q15651 99 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 ZNF782Q6ZMW2 699 aaPredicted RBP11.5□□□□□ -0.57
SSR4-207ENST00000471724 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 LHX4Q969G2 390 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 KIRREL1Q96J84 757 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 AUNIPQ9H7T9 357 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 TAF9BQ9HBM6 251 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 IDI2-AS1Q9NZ38 188 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 RABL2AQ9UBK7 228 aaPredicted RBP11.5□□□□□ -0.57
SSR4-207ENST00000471724 EXTL2Q9UBQ6 330 aa11.5□□□□□ -0.57
SSR4-207ENST00000471724 RABL2BQ9UNT1 228 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms