RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 IGHV3-43A0A0B4J1X8 118 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 TMEM30CPA0ZSE6 113 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A18PA6NE21 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A16PA6NEW6 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A20PA6NIJ5 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A12PA8MX19 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A5PA8MXJ8 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 C15orf65H3BRN8 121 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 H3BUI4 141 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 PIN1P1O15428 100 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A15PP0C7V4 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A13PP0C7W8 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A14PP0C7W9 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FAM90A24PP0C7X0 464 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 IGHV3-43DP0DP04 118 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 FSTP19883 344 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 VHLP40337 213 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 MNDAP41218 407 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 REG1BP48304 166 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 KCNJ3P48549 501 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 ARHGDIBP52566 201 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 INSL4Q14641 139 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 YIF1BQ5BJH7 314 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 CCDC144NLQ6NUI1 221 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-203ENST00000471344 JAGN1Q8N5M9 183 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 CREB3L1Q96BA8 519 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 AKR1E2Q96JD6 320 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 DERL3Q96Q80 235 aa12.2□□□□□ -0.46
COL1A1-203ENST00000471344 AMMECR1Q9Y4X0 333 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-203ENST00000471344 OOSP1A8MZH6 123 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 GPX5O75715 221 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 MAS1P04201 325 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 MYF6P23409 242 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 EMX1Q04741 257 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-203ENST00000471344 MADCAM1Q13477 382 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 HNF4GQ14541 408 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 C6orf141Q5SZD1 244 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 GLIPR1L1Q6UWM5 242 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 ZNF497Q6ZNH5 498 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 OR4F17Q8NGA8 305 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 NEK7Q8TDX7 302 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 MYDGFQ969H8 173 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 OR4F4Q96R69 305 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 S100A13Q99584 98 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 ANKRD60Q9BZ19 345 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 BANF2Q9H503 90 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 PLCXD1Q9NUJ7 323 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 CNOT2Q9NZN8 540 aaKnown RBP12.19□□□□□ -0.46
COL1A1-203ENST00000471344 CKLFQ9UBR5 152 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 MRPS28Q9Y2Q9 187 aaKnown RBP12.19□□□□□ -0.46
COL1A1-203ENST00000471344 MOB4Q9Y3A3 225 aa12.19□□□□□ -0.46
COL1A1-203ENST00000471344 IGHV3-72A0A0B4J1Y9 119 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 TCRBV4S1A1TA0A5B7 111 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 EFCAB10A6NFE3 127 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 SLC31A2O15432 143 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 IGKV1D-33P01593 117 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 IGKV1-33P01594 117 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 GTF2F2P13984 249 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 TMEM11P17152 192 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 CELP19835 753 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 HES1Q14469 280 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 MPV17LQ2QL34 196 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 Q6ZPA2 131 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 C5orf24Q7Z6I8 188 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 LINC00596Q86U02 117 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 LYPD6Q86Y78 171 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 C5orf56Q8N8D9 126 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 OR10X1Q8NGY0 326 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 ARL11Q969Q4 196 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 PHF21AQ96BD5 680 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 NOL4LQ96MY1 436 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-203ENST00000471344 RCC2Q9P258 522 aaKnown RBP12.18□□□□□ -0.46
COL1A1-203ENST00000471344 LINC00527Q9UJ94 153 aa12.18□□□□□ -0.46
COL1A1-203ENST00000471344 AIPO00170 330 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 SDCBPO00560 298 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-203ENST00000471344 HSD17B6O14756 317 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 MYL12BO14950 172 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 ZNF780AO75290 641 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-203ENST00000471344 MT-ND4P03905 459 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 IGLL1P15814 213 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 WNT4P56705 351 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 LOXL3P58215 753 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 TAS2R43P59537 309 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 KHDC1LQ5JSQ8 128 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 FAM27D1Q5T7N8 215 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 AWAT2Q6E213 333 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 ZNF329Q86UD4 541 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 STX19Q8N4C7 294 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 OR10A7Q8NGE5 316 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 PCDHB16Q9NRJ7 776 aa12.17□□□□□ -0.46
COL1A1-203ENST00000471344 IGHV1-3A0A0C4DH29 117 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 PF4V1P10720 104 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 RAB7AP51149 207 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 GP2P55259 537 aaKnown RBP12.16□□□□□ -0.46
COL1A1-203ENST00000471344 SIGIRRQ6IA17 410 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms