RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SGMS2Q8NHU3 365 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 OR51E1Q8TCB6 317 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 MRPL30Q8TCC3 161 aaKnown RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 ANAPC16Q96DE5 110 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 WDYHV1Q96HA8 205 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 TDRD6O60522 2096 aaKnown RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 POLR2AP24928 1970 aaKnown RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 PRSS37A4D1T9 235 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 KIAA1324LA8MWY0 1029 aaPredicted RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 PROB1E7EW31 1015 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 M0R296 226 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 OR7C2O60412 319 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 BGLAPP02818 100 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 EGR1P18146 543 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 CMPK1P30085 196 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 OTX2P32243 289 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SRP14P37108 136 aaKnown RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 ECI1P42126 302 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 COMPP49747 757 aaPredicted RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 BIDP55957 195 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 MTCP1P56278 107 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 HERV-K104P61576 105 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 QRFPP83859 136 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 TMEM267Q0VDI3 215 aaPredicted RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 MGAT2Q10469 447 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 RUNX2Q13950 521 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 ZIC1Q15915 447 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SAMD13Q5VXD3 122 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 VWA1Q6PCB0 445 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SLC24A5Q71RS6 500 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 TMEM25Q86YD3 366 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 FAM58AQ8N1B3 248 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 ARHGEF39Q8N4T4 335 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 OVCA2Q8WZ82 227 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 GPX7Q96SL4 187 aaPredicted RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 P2RX4Q99571 388 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SF3B5Q9BWJ5 86 aaKnown RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 KIR3DX1Q9H7L2 352 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 FBXL7Q9UJT9 491 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 WASHC3Q9Y3C0 194 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 PLXNA2O75051 1894 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 IGKV1D-42A0A075B6H8 117 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 OR2T8A6NH00 312 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SERINC4A6NH21 518 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SHISA7A6NL88 538 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 ADAM20O43506 726 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 CHST1O43916 411 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SEMA4FO95754 770 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 IGKV1D-16P01601 117 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 NBEAP1P0C6P0 100 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 HNRNPA2B1P22626 353 aaKnown RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 MPLP40238 635 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 CCR2P41597 374 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 PSG6Q00889 435 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 ZNF90Q03938 601 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 CCL14Q16627 93 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 EMC4Q5J8M3 183 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 TMEM234Q8WY98 164 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 BORCS7Q96B45 105 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 GPHA2Q96T91 129 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 MDFIQ99750 246 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SPIN2AQ99865 258 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 SPIN2BQ9BPZ2 258 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 RTN4RQ9BZR6 473 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 MTIF3Q9H2K0 278 aaKnown RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 G6PC2Q9NQR9 355 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 TMEM74BQ9NUR3 256 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 HCFC1R1Q9NWW0 138 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 DAPP1Q9UN19 280 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 VDAC3Q9Y277 283 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 TBL2Q9Y4P3 447 aaKnown RBP3.66□□□□□ -1.82
VPS50-210ENST00000471188 HEBP2Q9Y5Z4 205 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 PXMP4Q9Y6I8 212 aa3.66□□□□□ -1.82
VPS50-210ENST00000471188 LAMA2P24043 3122 aaKnown RBP3.65□□□□□ -1.82
VPS50-210ENST00000471188 ANAPC1Q9H1A4 1944 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 ESPL1Q14674 2120 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 ZNF816-ZNF321PA0A0X1KG74 233 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 DPRXA6NFQ7 191 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 OR5B21A6NL26 309 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 C22orf46C9J442 243 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 F2Z2F3 143 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 CORTO00230 105 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 FCN1O00602 326 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 SPINK4O60575 86 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 YPEL1O60688 119 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 MMP23AO75900 390 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 ACRP10323 421 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 PNMTP11086 282 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 AADACP22760 399 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 CTSSP25774 331 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 PRRX1P54821 245 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 GFRA1P56159 465 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 RPS18P62269 152 aaKnown RBP3.65□□□□□ -1.82
VPS50-210ENST00000471188 LCN2P80188 198 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 ROM1Q03395 351 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 FMODQ06828 376 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 MESP2Q0VG99 397 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 EXT1Q16394 746 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 CBLN3Q6UW01 205 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 OR2V1Q8NHB1 315 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms