RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 IFNA5P01569 189 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 HLA-HP01893 362 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 MPV17LQ2QL34 196 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 C4orf17Q53FE4 359 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 OR5D13Q8NGL4 314 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 ABHD5Q8WTS1 349 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 FRZBQ92765 325 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 ZNF407Q9C0G0 2248 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 CACNA1EQ15878 2313 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 H0Y980 276 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 NAPSAO96009 420 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 FABP4P15090 132 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 HIST1H1BP16401 226 aaKnown RBP11.28□□□□□ -0.6
SFXN3-205ENST00000470252 CLDN15P56746 228 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 PCBD1P61457 104 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 OR8G1Q15617 311 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 IL36RNQ9UBH0 155 aa11.28□□□□□ -0.6
SFXN3-205ENST00000470252 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A10PA6NDY2 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A7PA6NKC0 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 OR5H1A6NKK0 313 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 ZNF716A6NP11 495 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A22PA8MWA6 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A23PA8MXZ1 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 ZNHIT1O43257 154 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 CXCL13O43927 109 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 PTBP3O95758 552 aaKnown RBP11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A15PP0C7V4 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A13PP0C7W8 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A14PP0C7W9 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 FAM90A24PP0C7X0 464 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 COX6A1P12074 109 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 ZNF787Q6DD87 383 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 OR10G4Q8NGN3 311 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 IMMP1LQ96LU5 166 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 RSG1Q9BU20 258 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 ZNF665Q9H7R5 613 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 TNRC6BQ9UPQ9 1833 aaKnown RBP11.27□□□□□ -0.61
SFXN3-205ENST00000470252 TRAV1-1A0A0B4J248 108 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 IGKV1-6A0A0C4DH72 117 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.61
SFXN3-205ENST00000470252 TUSC2O75896 110 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 UMODP07911 640 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 GPM6AP51674 278 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 TRIM61Q5EBN2 209 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 LCN15Q6UWW0 184 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 H1FOOQ8IZA3 346 aaPredicted RBP11.27□□□□□ -0.61
SFXN3-205ENST00000470252 OR56B2PQ8NGI1 322 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 HIPK2Q9H2X6 1198 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 WDR54Q9H977 334 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 GPR35Q9HC97 309 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 SH2D2AQ9NP31 389 aa11.27□□□□□ -0.61
SFXN3-205ENST00000470252 LY6G6EA0A0G2JKS1 128 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 A0A0G2JMM0 328 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 KIR2DS1A0A191URI9 304 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 A0A1W2PPB8 328 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 A0A1W2PRS3 328 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 KIR3DP1A8MWS1 328 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 CLDN34H7C241 214 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 DNPH1O43598 174 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 BCL2P10415 239 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 CCNOP22674 350 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 KIR2DS4P43632 304 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 FGF8P55075 233 aaPredicted RBP11.26□□□□□ -0.61
SFXN3-205ENST00000470252 B3GALT5-AS1P59052 145 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 FGF12P61328 243 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 GAMTQ14353 236 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 KIR2DS1Q14954 304 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 SRSF7Q16629 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
SFXN3-205ENST00000470252 IZUMO4Q1ZYL8 232 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 FAM180AQ6UWF9 173 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 RPS19BP1Q86WX3 136 aaKnown RBP11.26□□□□□ -0.61
SFXN3-205ENST00000470252 CPEB3Q8NE35 698 aaKnown RBP11.26□□□□□ -0.61
SFXN3-205ENST00000470252 OR51H1Q8NH63 302 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 RNASE11Q8TAA1 199 aaKnown RBP11.26□□□□□ -0.61
SFXN3-205ENST00000470252 SCGB1C1Q8TD33 95 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 HLA-CQ95604 372 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 IL22RA2Q969J5 263 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 SPSB4Q96A44 273 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 GPR146Q96CH1 333 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 VSIRQ9H7M9 311 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 CISD1Q9NZ45 108 aaKnown RBP11.26□□□□□ -0.61
SFXN3-205ENST00000470252 U3KQA8 63 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 A0A1B0GU03 582 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 CYB5R3P00387 301 aaPredicted RBP11.26□□□□□ -0.61
SFXN3-205ENST00000470252 IGHV3-9P01782 118 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 CYC1P08574 325 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 RNF224P0DH78 156 aa11.26□□□□□ -0.61
SFXN3-205ENST00000470252 PNRC1Q12796 327 aaPredicted RBP11.26□□□□□ -0.61
SFXN3-205ENST00000470252 PRDX4Q13162 271 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms