RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 XRCC3O43542 346 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 CLPXO76031 633 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 IGHV1-69P01742 117 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 CD3GP09693 182 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 Q3ZCU0 254 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 MIDNQ504T8 468 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 PLAC9Q5JTB6 97 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 BRICD5Q6PL45 260 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 Q71RC1 249 aaPredicted RBP10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 TCF23Q7RTU1 214 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 TPRX1Q8N7U7 411 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 SAMD12Q8N8I0 201 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 OR11H6Q8NGC7 330 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 DYNC2LI1Q8TCX1 351 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 TNFRSF14Q92956 283 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 RBM38Q9H0Z9 239 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 KCNK15Q9H427 330 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 RABL2AQ9UBK7 228 aaPredicted RBP10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 RABL2BQ9UNT1 228 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 A3GALT2U3KPV4 340 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 ARHGAP32A7KAX9 2087 aa10.35□□□□□ -0.75
SPTLC1-204ENST00000469778 NSD1Q96L73 2696 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 A0A075B6Q4 140 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 A0A0A6YYJ9 748 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 CENPVL3A0A0U1RRI6 287 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 DIRAS3O95661 229 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 IFNA2P01563 188 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 MELTFP08582 738 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 CCL3L1P16619 93 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 CDK2P24941 298 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 CD34P28906 385 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 TALDO1P37837 337 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 GLP1RP43220 463 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 PRRX1P54821 245 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 SPCS2Q15005 226 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 CDNFQ49AH0 187 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 LY6G6FQ5SQ64 297 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 HACD4Q5VWC8 232 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 STEAP3Q658P3 488 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 ZNF880Q6PDB4 577 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 C8orf31Q8N9H6 132 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 OR5H6Q8NGV6 325 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 ZNF596Q8TC21 504 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 MRPL30Q8TCC3 161 aaKnown RBP10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 GALMQ96C23 342 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 CMSS1Q9BQ75 279 aaKnown RBP10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 MS4A7Q9GZW8 240 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 TMEM133Q9H2Q1 129 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 CHMP1AQ9HD42 196 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 BATF3Q9NR55 127 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 CALYQ9NYX4 217 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 ZNF581Q9P0T4 197 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 COMMD3Q9UBI1 195 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 AK3Q9UIJ7 227 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 ADAM30Q9UKF2 790 aa10.34□□□□□ -0.75
SPTLC1-204ENST00000469778 F2RL2O00254 374 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 DTYMKP23919 212 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 MNDAP41218 407 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 KIR2DS4P43632 304 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 HTD2P86397 168 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 PLA2G7Q13093 441 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 ARFRP1Q13795 201 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 KIR2DS1Q14954 304 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 KLF17Q5JT82 389 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 Q6ZS49 121 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 MRGPRDQ8TDS7 321 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 DYRK2Q92630 601 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 LHX4Q969G2 390 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 ARL11Q969Q4 196 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 SLC25A38Q96DW6 304 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 CLEC7AQ9BXN2 247 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 ING3Q9NXR8 418 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 IDI2-AS1Q9NZ38 188 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 KCNK7Q9Y2U2 307 aa10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 SONP18583 2426 aaKnown RBP10.33□□□□□ -0.76
SPTLC1-204ENST00000469778 TRAV18A0A075B6X5 111 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 RNASEK-C17orf49H0YIS7 233 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 RGS11O94810 467 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 GNB3P16520 340 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 EPHA1P21709 976 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 CBX5P45973 191 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 LGALS4P56470 323 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 MOGAT2Q3SYC2 334 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 TMEM69Q5SWH9 247 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 MINOS1Q5TGZ0 78 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 RBMS3Q6XE24 437 aaKnown RBP10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 BEND2Q8NDZ0 799 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 OR4K15Q8NH41 348 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 OR9G1Q8NH87 305 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 CCDC107Q8WV48 283 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 KIRREL1Q96J84 757 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 JMJD8Q96S16 334 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 MMP27Q9H306 513 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 GHITMQ9H3K2 345 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 PRDM13Q9H4Q3 707 aa10.32□□□□□ -0.76
SPTLC1-204ENST00000469778 TAF9BQ9HBM6 251 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms