RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 A0A087X0M5 115 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 A0A1B0GX30 115 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 E9PLN8 166 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 PHOX2AO14813 284 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 EFNA2O43921 213 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 TRGC1P0CF51 173 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 NR2C1P13056 603 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 GABRR1P24046 479 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 CDAP32320 146 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 RNF4P78317 190 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 TLE4Q04727 773 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 BAXQ07812 192 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 MYBPHQ13203 477 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 ASCL4Q6XD76 172 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 BEND4Q6ZU67 534 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 C1orf87Q8N0U7 546 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 CYB561D1Q8N8Q1 229 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 PLPP5Q8NEB5 264 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 RNASEH2CQ8TDP1 164 aaKnown RBP8.25□□□□□ -1.09
HDAC3-205ENST00000469550 TOMM40LQ969M1 308 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 FAM210BQ96KR6 192 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 RHOVQ96L33 236 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 OXGR1Q96P68 337 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 SPIN2AQ99865 258 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 SPIN2BQ9BPZ2 258 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 HDHD3Q9BSH5 251 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-205ENST00000469550 METTL9Q9H1A3 318 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 LYRM2Q9NU23 88 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-205ENST00000469550 PITPNC1Q9UKF7 332 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 LIPGQ9Y5X9 500 aa8.25□□□□□ -1.09
HDAC3-205ENST00000469550 TRBV24-1A0A075B6N3 115 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 IGLV3-32A0A0A0MS00 114 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 A1L4Q6 167 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 FAM24AA6NFZ4 105 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 DVL1O14640 695 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 DBHP09172 617 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 QDPRP09417 244 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 TMEM252Q8N6L7 170 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 ZFP62Q8NB50 900 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 GJC3Q8NFK1 279 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 OR10AD1Q8NGE0 317 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 FRZBQ92765 325 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 RAB24Q969Q5 203 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 SPSB1Q96BD6 273 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 MEGF10Q96KG7 1140 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 NOL4LQ96MY1 436 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 FAAP24Q9BTP7 215 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 ELL3Q9HB65 397 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 ZNF160Q9HCG1 818 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 PLSCR2Q9NRY7 297 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 DKKL1Q9UK85 242 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 VDAC3Q9Y277 283 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 NBPF19A0A087WUL8 3843 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 POLEQ07864 2286 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 A0A1B0GV50 99 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 DUXBA0A1W2PPF3 345 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 IGSF23A1L1A6 192 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 SMCO3A2RU48 225 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 TRDCB7Z8K6 153 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 H3BML4 177 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 CLDN34H7C241 214 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 PHF1O43189 567 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 KLK2P20151 261 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 FBLP22087 321 aaKnown RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 OTX1P32242 354 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 NKX2-1P43699 371 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 SPCS3P61009 180 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 HIST1H3AP68431 136 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 FOXO1Q12778 655 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 JOSD1Q15040 202 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 OR8B8Q15620 311 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 TAF9Q16594 264 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 AKR1C8PQ5T2L2 129 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 GFI1BQ5VTD9 330 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 DPPA2Q7Z7J5 298 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 SLC35G3Q8N808 338 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 BEND2Q8NDZ0 799 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 NPRL2Q8WTW4 380 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 POM121Q96HA1 1249 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 REEP6Q96HR9 211 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 PACRGQ96M98 296 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 JSRP1Q96MG2 331 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-205ENST00000469550 TMEM56Q96MV1 263 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 ABHD14AQ9BUJ0 271 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 VN1R1Q9GZP7 353 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 CTDSP1Q9GZU7 261 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 ZNF700Q9H0M5 742 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 TMEM56-RWDD3S4R434 201 aa8.24□□□□□ -1.09
HDAC3-205ENST00000469550 LOC102723971A0A1B0GUV8 181 aa8.23□□□□□ -1.09
HDAC3-205ENST00000469550 C5orf63A6NC05 138 aa8.23□□□□□ -1.09
HDAC3-205ENST00000469550 GEMIN2O14893 280 aaKnown RBP8.23□□□□□ -1.09
HDAC3-205ENST00000469550 CYB5R3P00387 301 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-205ENST00000469550 EDN3P14138 238 aa8.23□□□□□ -1.09
HDAC3-205ENST00000469550 FABP4P15090 132 aa8.23□□□□□ -1.09
HDAC3-205ENST00000469550 FAHP16930 419 aa8.23□□□□□ -1.09
HDAC3-205ENST00000469550 FKBP2P26885 142 aaKnown RBP8.23□□□□□ -1.09
HDAC3-205ENST00000469550 IL2RGP31785 369 aa8.23□□□□□ -1.09
HDAC3-205ENST00000469550 ZNF41P51814 821 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-205ENST00000469550 MTCP1P56278 107 aa8.23□□□□□ -1.09
HDAC3-205ENST00000469550 H3F3AP84243 136 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms