RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 RNF122Q9H9V4 155 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 TUSC2O75896 110 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 CTRB1P17538 263 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 P2RY1P47900 373 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 CTRB2Q6GPI1 263 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 ZNF573Q86YE8 665 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 SCCPDHQ8NBX0 429 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 TMEM56Q96MV1 263 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 C20orf24Q9BUV8 137 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 FZR1Q9UM11 496 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 PRELID1Q9Y255 219 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 TMEM56-RWDD3S4R434 201 aa16.22■□□□□ 0.19
VIM-203ENST00000469543 FAM90A10PA6NDY2 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A18PA6NE21 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A16PA6NEW6 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A20PA6NIJ5 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A8PA6NJQ4 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A7PA6NKC0 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A22PA8MWA6 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A12PA8MX19 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A5PA8MXJ8 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A23PA8MXZ1 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 DEGS1O15121 323 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 TSPAN15O95858 294 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A15PP0C7V4 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A13PP0C7W8 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A14PP0C7W9 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM90A24PP0C7X0 464 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 DANCRP0C864 163 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 SPP1P10451 314 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 TNFSF10P50591 281 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM76BQ5HYJ3 339 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 CNEP1R1Q8N9A8 125 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 PLPPR1Q8TBJ4 325 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 GLRX2Q9NS18 164 aa16.21■□□□□ 0.19
VIM-203ENST00000469543 FAM212BQ9NTI7 297 aaPredicted RBP16.21■□□□□ 0.19
VIM-203ENST00000469543 HEATR1Q9H583 2144 aaKnown RBP16.21■□□□□ 0.18
VIM-203ENST00000469543 GPR37O15354 613 aa16.21■□□□□ 0.18
VIM-203ENST00000469543 PMELP40967 661 aa16.21■□□□□ 0.18
VIM-203ENST00000469543 IL13RA2Q14627 380 aa16.21■□□□□ 0.18
VIM-203ENST00000469543 ZNF826PQ6ZT77 177 aa16.21■□□□□ 0.18
VIM-203ENST00000469543 OR10J5Q8NHC4 309 aa16.21■□□□□ 0.18
VIM-203ENST00000469543 TRIB1Q96RU8 372 aa16.21■□□□□ 0.18
VIM-203ENST00000469543 CDRT15L2A8MXV6 281 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 CHST1O43916 411 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 ZNF806P0C7X5 589 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 PSG2P11465 335 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 ZNF14P17017 642 aaPredicted RBP16.2■□□□□ 0.18
VIM-203ENST00000469543 CAMLGP49069 296 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 ZNF324BQ6AW86 544 aaPredicted RBP16.2■□□□□ 0.18
VIM-203ENST00000469543 Q6ZRM9 215 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 EIF5A2Q9GZV4 153 aaKnown RBP16.2■□□□□ 0.18
VIM-203ENST00000469543 ARV1Q9H2C2 271 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 PPP1R3CQ9UQK1 317 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 KIR2DS1A0A191URI9 304 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 PPP1CCP36873 323 aaKnown RBP16.2■□□□□ 0.18
VIM-203ENST00000469543 KIR2DS4P43632 304 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 RUNX1Q01196 453 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 ZNF154Q13106 437 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 KIR2DS1Q14954 304 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 GPR157Q5UAW9 335 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 FAM122CQ6P4D5 195 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 Q6ZS49 121 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 DEFB124Q8NES8 71 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 LOXL4Q96JB6 756 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 CACFD1Q9UGQ2 172 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 MPC1Q9Y5U8 109 aa16.2■□□□□ 0.18
VIM-203ENST00000469543 OR2H2O95918 312 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 IGLV2-14P01704 120 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 DAOP14920 347 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 CCL20P78556 96 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 HFEQ30201 348 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 NMSQ5H8A3 153 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 Q6P435 159 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 OR5C1Q8NGR4 320 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 SLC25A40Q8TBP6 338 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 GINS3Q9BRX5 216 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 SCRT1Q9BWW7 348 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 C11orf1Q9H5F2 150 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 ZDHHC11Q9H8X9 412 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 OR14J1Q9UGF5 321 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 TINAGQ9UJW2 476 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 FBXO7Q9Y3I1 522 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 SMPD2O60906 423 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 SNAPINO95295 136 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 PVALBP20472 110 aaPredicted RBP16.19■□□□□ 0.18
VIM-203ENST00000469543 PPP1CBP62140 327 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 IL24Q13007 206 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 TMEM252Q8N6L7 170 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 LYPD6BQ8NI32 183 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 FAM213BQ8TBF2 198 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 SAV1Q9H4B6 383 aaPredicted RBP16.19■□□□□ 0.18
VIM-203ENST00000469543 TAAR3PQ9P1P4 343 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 OR2W1Q9Y3N9 320 aa16.19■□□□□ 0.18
VIM-203ENST00000469543 RELNP78509 3460 aa16.18■□□□□ 0.18
VIM-203ENST00000469543 BORCS7-ASMTA0A0B4J1R7 106 aa16.18■□□□□ 0.18
VIM-203ENST00000469543 WNT9BO14905 357 aa16.18■□□□□ 0.18
VIM-203ENST00000469543 TSPAN9O75954 239 aa16.18■□□□□ 0.18
VIM-203ENST00000469543 ZNF16P17020 682 aaPredicted RBP16.18■□□□□ 0.18
VIM-203ENST00000469543 SNCAP37840 140 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms