RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CEACAM18A8MTB9 384 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 A8MWL6 223 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 C16orf90A8MZG2 172 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 CBR3O75828 277 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 MAS1P04201 325 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 CCNOP22674 350 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 ARR3P36575 388 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 HTR2BP41595 481 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 IL5RAQ01344 420 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 ADIGQ0VDE8 80 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 LAMTOR4Q0VGL1 99 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 MAD2L1BPQ15013 274 aaPredicted RBP2.74□□□□□ -1.97
LSM5-209ENST00000468872 PSG3Q16557 428 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 FBXL19-AS1Q494R0 122 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 MED27Q6P2C8 311 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 MORN3Q6PF18 240 aaPredicted RBP2.74□□□□□ -1.97
LSM5-209ENST00000468872 RBM45Q8IUH3 476 aaKnown RBP2.74□□□□□ -1.97
LSM5-209ENST00000468872 BBS7Q8IWZ6 715 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 CA13Q8N1Q1 262 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 APCDD1LQ8NCL9 501 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 CLHC1Q8NHS4 586 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 NT5CQ8TCD5 201 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 KLF14Q8TD94 323 aaPredicted RBP2.74□□□□□ -1.97
LSM5-209ENST00000468872 ZNF649Q9BS31 505 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 SYT4Q9H2B2 425 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 RAB23Q9ULC3 237 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 SLC7A11Q9UPY5 501 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 V9GYY5 206 aaPredicted RBP2.74□□□□□ -1.97
LSM5-209ENST00000468872 DUOX1Q9NRD9 1551 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 RTL9Q8NET4 1388 aa2.74□□□□□ -1.97
LSM5-209ENST00000468872 MEGF8Q7Z7M0 2845 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 A0A0G2JMP0 313 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 A0A0X1KG70 313 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 ZNF98A6NK75 572 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 SC5DO75845 299 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 CD5P06127 495 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 BGNP21810 368 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 DEKP35659 375 aaKnown RBP2.73□□□□□ -1.97
LSM5-209ENST00000468872 PSMB2P49721 201 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 RGS6P49758 472 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 TNNC1P63316 161 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 BTN1A1Q13410 526 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 SYCP1Q15431 976 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 KPRPQ5T749 579 aaPredicted RBP2.73□□□□□ -1.97
LSM5-209ENST00000468872 ERICH5Q6P6B1 374 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 LRRC8AQ8IWT6 810 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 LINC00337Q8N6G1 96 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 OR52N1Q8NH53 320 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 ANGPTL6Q8NI99 470 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 ZNF420Q8TAQ5 688 aaPredicted RBP2.73□□□□□ -1.97
LSM5-209ENST00000468872 TMED9Q9BVK6 235 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 MS4A8Q9BY19 250 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 FRMD8P1Q9BZ68 369 aaPredicted RBP2.73□□□□□ -1.97
LSM5-209ENST00000468872 TBL1XR1Q9BZK7 514 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 PORCNQ9H237 461 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 DHX35Q9H5Z1 703 aaKnown RBP2.73□□□□□ -1.97
LSM5-209ENST00000468872 RAB22AQ9UL26 194 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 AP3M1Q9Y2T2 418 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 ACOT9Q9Y305 439 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 COL1A2P08123 1366 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 NID2Q14112 1375 aa2.73□□□□□ -1.97
LSM5-209ENST00000468872 COL6A6A6NMZ7 2263 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 KIAA1109Q2LD37 5005 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 ERICH2A1L162 156 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 E7EWF7 191 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 PRAMEF26H0Y7S4 382 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 YEATS4O95619 227 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 NQO2P16083 231 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 LAMA1P25391 3075 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 RPS12P25398 132 aaKnown RBP2.72□□□□□ -1.97
LSM5-209ENST00000468872 MPV17P39210 176 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 MAP3K7CLP57077 242 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 PMVKQ15126 192 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 MAPRE2Q15555 327 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 TOMM34Q15785 309 aaPredicted RBP2.72□□□□□ -1.97
LSM5-209ENST00000468872 VAMP3Q15836 100 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 ZNF678Q5SXM1 525 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 CSPG4Q6UVK1 2322 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 PDPNQ86YL7 162 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 SELENOHQ8IZQ5 122 aaKnown RBP2.72□□□□□ -1.97
LSM5-209ENST00000468872 FAM9CQ8IZT9 166 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 RNF10Q8N5U6 811 aaKnown RBP2.72□□□□□ -1.97
LSM5-209ENST00000468872 PDCD6IPQ8WUM4 868 aaKnown RBP2.72□□□□□ -1.97
LSM5-209ENST00000468872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.72□□□□□ -1.97
LSM5-209ENST00000468872 CDKL2Q92772 493 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 ADTRPQ96IZ2 230 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 GLT1D1Q96MS3 346 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 SPACA5Q96QH8 159 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 BEX2Q9BXY8 128 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 SLC38A1Q9H2H9 487 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 MFSD1Q9H3U5 465 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 VCX3AQ9NNX9 186 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 EURLQ9NYK6 297 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 CD300AQ9UGN4 299 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 RWDD2AQ9UIY3 292 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 ENPP5Q9UJA9 477 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 SHROOM3Q8TF72 1996 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 CUBNO60494 3623 aa2.72□□□□□ -1.97
LSM5-209ENST00000468872 TENM1Q9UKZ4 2725 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms