RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 GFOD1Q9NXC2 390 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 GMPR2Q9P2T1 348 aaKnown RBP4.38□□□□□ -1.71
CXXC4-202ENST00000466963 TVP23AA6NH52 213 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 NBR2O15453 112 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 TTRP02766 147 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 RRASP10301 218 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 NPBWR2P48146 333 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 CDK5Q00535 292 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 ZFAND6Q6FIF0 208 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 C16orf89Q6UX73 402 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 SLC16A13Q7RTY0 426 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 FAM220AQ7Z4H9 259 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 VTCN1Q7Z7D3 282 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 COMMD2Q86X83 199 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 TRMT10AQ8TBZ6 339 aaKnown RBP4.38□□□□□ -1.71
CXXC4-202ENST00000466963 ST6GALNAC5Q9BVH7 336 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 MTCH1Q9NZJ7 389 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 GAB2Q9UQC2 676 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 NUBP2Q9Y5Y2 271 aa4.38□□□□□ -1.71
CXXC4-202ENST00000466963 A0A0B4J203 849 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 A0A1B0GTI1 187 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SNTNA6NMZ2 147 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 J3KTA2 159 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SLC22A1O15245 554 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SYT7O43581 403 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 OR2H2O95918 312 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 OSMP13725 252 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 ARSBP15848 533 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 PSMB6P28072 239 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 C5orf64Q2M2E5 130 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 PRAMEF5Q5TYX0 476 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 Q6P435 159 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 MOB1BQ7L9L4 216 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 CATSPERDQ86XM0 798 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SLC38A6Q8IZM9 456 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 OR9G4Q8NGQ1 327 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 RFKQ969G6 155 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 TEAD3Q99594 435 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 ZNF251Q9BRH9 671 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 H2AFY2Q9P0M6 372 aaPredicted RBP4.37□□□□□ -1.71
CXXC4-202ENST00000466963 PIPOXQ9P0Z9 390 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 METTL15A6NJ78 407 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 TRIM64CA6NLI5 447 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 TFAP2AP05549 437 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 TNFRSF1BP20333 461 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 HTR1FP30939 366 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 TPBGQ13641 420 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 FAM98BQ52LJ0 330 aaKnown RBP4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SOHLH1Q5JUK2 328 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 NXNL2Q5VZ03 156 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 MOB3BQ86TA1 216 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 TMEM104Q8NE00 496 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 OR51E1Q8TCB6 317 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 RGP1Q92546 391 aaPredicted RBP4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SNAPC3Q92966 411 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 OPALINQ96PE5 141 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SPACA5Q96QH8 159 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 RIMS4Q9H426 269 aaPredicted RBP4.37□□□□□ -1.71
CXXC4-202ENST00000466963 MBNL3Q9NUK0 354 aaKnown RBP4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SMPD3Q9NY59 655 aaPredicted RBP4.37□□□□□ -1.71
CXXC4-202ENST00000466963 ETAA1Q9NY74 926 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 IGHV3-64DA0A0J9YX35 117 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SLC33A1O00400 549 aaPredicted RBP4.37□□□□□ -1.71
CXXC4-202ENST00000466963 SLC2A1P11166 492 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 COX4I1P13073 169 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 RPS16P62249 146 aaKnown RBP4.37□□□□□ -1.71
CXXC4-202ENST00000466963 LIN54Q6MZP7 749 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 ZNF562Q6V9R5 426 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 OR56B4Q8NH76 319 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 FGFR1OP2Q9NVK5 253 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 ZNF319Q9P2F9 582 aa4.37□□□□□ -1.71
CXXC4-202ENST00000466963 TEX48A0A1B0GUV7 120 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 NCBP2LA6PVI3 153 aaKnown RBP4.36□□□□□ -1.71
CXXC4-202ENST00000466963 SNX3O60493 162 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 YPEL1O60688 119 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 CDK2AP2O75956 126 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 IFNA4P05014 189 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 ZNF20P17024 532 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 PRKACAP17612 351 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 LSAMPQ13449 338 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 IRF3Q14653 427 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 ASPHD1Q5U4P2 390 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 OR2T5Q6IEZ7 315 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 SLC25A26Q70HW3 274 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 ASRGL1Q7L266 308 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 OR2T29Q8NH02 315 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 GIPC3Q8TF64 312 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 YPEL2Q96QA6 119 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 FBXL7Q9UJT9 491 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 PSG11Q9UQ72 335 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 LOC102724200A0A096LPH7 203 aaPredicted RBP4.36□□□□□ -1.71
CXXC4-202ENST00000466963 NME4O00746 187 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 SULT1B1O43704 296 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 LGALS7P47929 136 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 PSME3P61289 254 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 CBX3Q13185 183 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 EDDM3AQ14507 147 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 LGALS9BQ3B8N2 356 aa4.36□□□□□ -1.71
CXXC4-202ENST00000466963 RSBN1Q5VWQ0 802 aaPredicted RBP4.36□□□□□ -1.71
CXXC4-202ENST00000466963 LIPKQ5VXJ0 399 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms