RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 FAM173AQ9BQD7 235 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 AGMATQ9BSE5 352 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 GATA5Q9BWX5 397 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 SLC17A9Q9BYT1 436 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 SLC25A39Q9BZJ4 359 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-212ENST00000466845 OR2J1Q9GZK6 312 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 NANOGQ9H9S0 305 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 PELI2Q9HAT8 420 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 TAF9BQ9HBM6 251 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 GPR84Q9NQS5 396 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CISHQ9NSE2 258 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 SLC23A2Q9UGH3 650 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 HS3ST2Q9Y278 367 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 PPP2R2CQ9Y2T4 447 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 OR51B2Q9Y5P1 312 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 CDK5RAP2Q96SN8 1893 aa4.72□□□□□ -1.65
LRCH3-212ENST00000466845 MGAMO43451 1857 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 MYO5AQ9Y4I1 1855 aaKnown RBP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 A0A1B0GTH9 108 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 OR5H15A6NDH6 313 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 IFITM5A6NNB3 132 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 ZNF732B4DXR9 585 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 HSD17B6O14756 317 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 KBTBD11O94819 623 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 CCL5P13501 91 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 MYL12AP19105 171 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 TNFRSF1BP20333 461 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 CRHBPP24387 322 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 CDK2P24941 298 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 RPL3P39023 403 aaKnown RBP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 OR1D4P47884 311 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 SSR4P51571 173 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 PDX1P52945 283 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 ARPP19P56211 112 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 BACE1P56817 501 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 RPS14P62263 151 aaKnown RBP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 FKBP3Q00688 224 aaKnown RBP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 GNA12Q03113 381 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 UNC119Q13432 240 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 HERPUD1Q15011 391 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 NECTIN1Q15223 517 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 SLC25A35Q3KQZ1 300 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 TNFAIP8L2Q6P589 184 aaPredicted RBP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 ARL9Q6T311 187 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 EPGNQ6UW88 154 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 TMEM64Q6YI46 380 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 RBM23Q86U06 439 aaKnown RBP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 MMD2Q8IY49 270 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 SLC22A15Q8IZD6 547 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 VKORC1L1Q8N0U8 176 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 ZNF664Q8N3J9 261 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 SPICQ8N5J4 248 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 PRELID2Q8N945 189 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 ZNF740Q8NDX6 193 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 OR4S1Q8NGB4 309 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 OR4K1Q8NGD4 311 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 OR13A1Q8NGR1 328 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 OR2K2Q8NGT1 345 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 OR51Q1Q8NH59 317 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 PPCDCQ96CD2 204 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 GALNT14Q96FL9 552 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 LYZL4Q96KX0 146 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 RNF157Q96PX1 679 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 OR2M4Q96R27 311 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 TRIB3Q96RU7 358 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 FOXC2Q99958 501 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 TMEM121Q9BTD3 319 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 SMIM3Q9BZL3 60 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 VSIRQ9H7M9 311 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 RNF121Q9H920 327 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 KCNJ16Q9NPI9 418 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 UQCC1Q9NVA1 299 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 CISD1Q9NZ45 108 aaKnown RBP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 MRPL27Q9P0M9 148 aaKnown RBP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 NAT8Q9UHE5 227 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 PRNDQ9UKY0 176 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.71□□□□□ -1.66
LRCH3-212ENST00000466845 LOXL2Q9Y4K0 774 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 KLF12Q9Y4X4 402 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 SIPA1L1O43166 1804 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 DENND4AQ7Z401 1863 aa4.71□□□□□ -1.66
LRCH3-212ENST00000466845 IGHV2OR16-5A0A0B4J2B6 119 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 MSGN1A6NI15 193 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 FABP5P3A8MUU1 101 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 EDF1O60869 148 aaKnown RBP4.7□□□□□ -1.66
LRCH3-212ENST00000466845 NDUFB8O95169 186 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 LSM8O95777 96 aaKnown RBP4.7□□□□□ -1.66
LRCH3-212ENST00000466845 CD2P06729 351 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 PVRP15151 417 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 ORM2P19652 201 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 EDNRAP25101 427 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 OPRL1P41146 370 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 GPR6P46095 362 aaPredicted RBP4.7□□□□□ -1.66
LRCH3-212ENST00000466845 DLX1P56177 255 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 RPL27P61353 136 aaKnown RBP4.7□□□□□ -1.66
LRCH3-212ENST00000466845 NCS1P62166 190 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 GNG5P63218 68 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 TNFAIP6P98066 277 aaPredicted RBP4.7□□□□□ -1.66
LRCH3-212ENST00000466845 LY6DQ14210 128 aa4.7□□□□□ -1.66
LRCH3-212ENST00000466845 CLINT1Q14677 625 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms