RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CTXN2P0C2S0 81 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 HNRNPKP61978 463 aaKnown RBP eCLIP16.95■□□□□ 0.3
SDF4-205ENST00000465727 RSPO4Q2I0M5 234 aaPredicted RBP16.95■□□□□ 0.3
SDF4-205ENST00000465727 LCN15Q6UWW0 184 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 GPR137CQ8N3F9 429 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 TMEM170AQ8WVE7 144 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 NAT6Q93015 286 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 WASF3Q9UPY6 502 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 GAB2Q9UQC2 676 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 A0A1B0GWJ7 208 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 A0A1W2PR77 199 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 CNOT4O95628 575 aaKnown RBP16.95■□□□□ 0.3
SDF4-205ENST00000465727 IL18BPO95998 194 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 LCATP04180 440 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 SNRPCP09234 159 aaKnown RBP16.95■□□□□ 0.3
SDF4-205ENST00000465727 S100GP29377 79 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 CCKARP32238 428 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 ZNF726P1Q15940 193 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 Q8NFD4 153 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 OR51G1Q8NGK1 321 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 OR1F12Q8NHA8 337 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 TMEM18Q96B42 140 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 SPACA9Q96E40 222 aaPredicted RBP16.95■□□□□ 0.3
SDF4-205ENST00000465727 OR5B12Q96R08 314 aa16.95■□□□□ 0.3
SDF4-205ENST00000465727 PARD6GQ9BYG4 376 aaPredicted RBP16.95■□□□□ 0.3
SDF4-205ENST00000465727 CCDC163A0A0D9SF12 145 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 KIR2DS1A0A191URI9 304 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 CEBPZOSA8MTT3 80 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 MDH2P40926 338 aaKnown RBP16.94■□□□□ 0.3
SDF4-205ENST00000465727 KIR2DS4P43632 304 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 DLX2Q07687 328 aaPredicted RBP16.94■□□□□ 0.3
SDF4-205ENST00000465727 KIR2DS1Q14954 304 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 TMEM241Q24JQ0 296 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 RABEPKQ7Z6M1 372 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 EXTL1Q92935 676 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 ADGRG7Q96K78 797 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 SMIM7Q9BQ49 75 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 ADAMTS20P59510 1910 aa16.94■□□□□ 0.3
SDF4-205ENST00000465727 ZNF705GA8MUZ8 300 aaPredicted RBP16.93■□□□□ 0.3
SDF4-205ENST00000465727 HLA-HP01893 362 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 CST2P09228 141 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 IQCJQ1A5X6 159 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 ACOT6Q3I5F7 207 aaPredicted RBP16.93■□□□□ 0.3
SDF4-205ENST00000465727 KRTAP27-1Q3LI81 207 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 TMEM41BQ5BJD5 291 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 C16orf82Q7Z2V1 217 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 RSG1Q9BU20 258 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 PRSS50Q9UI38 385 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 LAMP3Q9UQV4 416 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 GON4LQ3T8J9 2241 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 hCG_38984A0A1B0GV85 526 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 KBTBD11O94819 623 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 NAPSAO96009 420 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 METTL15P1P0C7V9 234 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 CD27P26842 260 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 CLDN15P56746 228 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 RPS18P62269 152 aaKnown RBP16.93■□□□□ 0.3
SDF4-205ENST00000465727 HYAL1Q12794 435 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 ADIRFQ15847 76 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 PLCXD3Q63HM9 321 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 DCAF16Q9NXF7 216 aa16.93■□□□□ 0.3
SDF4-205ENST00000465727 HBG1P69891 147 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 HBG2P69892 147 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 DAZAP2Q15038 168 aaPredicted RBP16.92■□□□□ 0.3
SDF4-205ENST00000465727 BSXQ3C1V8 233 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 ZNF66Q6ZN08 573 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 NAXEQ8NCW5 288 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 IGKV1D-13A0A0B4J2D9 117 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 ZNF816-ZNF321PA0A0X1KG74 233 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 MAP1LC3B2A6NCE7 125 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 OR6C6A6NF89 314 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 KIAA1324LA8MWY0 1029 aaPredicted RBP16.92■□□□□ 0.3
SDF4-205ENST00000465727 TMEM250H0YL14 139 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 H7BYZ3 331 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 DKK1O94907 266 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 NXPH3O95157 252 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 IGKV1-13P0DP09 117 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 MDKP21741 143 aaPredicted RBP16.92■□□□□ 0.3
SDF4-205ENST00000465727 F2RP25116 425 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 GALR1P47211 349 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 TNFRSF9Q07011 255 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 TMEM267Q0VDI3 215 aaPredicted RBP16.92■□□□□ 0.3
SDF4-205ENST00000465727 PDCD1Q15116 288 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 LRRC75BQ2VPJ9 315 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 ZNF295-AS1Q8N0V1 137 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 ZNF525Q8N782 197 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 ZNF611Q8N823 705 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 MAP1LC3BQ9GZQ8 125 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 RBKSQ9H477 322 aa16.92■□□□□ 0.3
SDF4-205ENST00000465727 TP53I11O14683 189 aa16.91■□□□□ 0.3
SDF4-205ENST00000465727 ZNF737O75373 536 aa16.91■□□□□ 0.3
SDF4-205ENST00000465727 PGLYRP1O75594 196 aaPredicted RBP16.91■□□□□ 0.3
SDF4-205ENST00000465727 HRASP01112 189 aa16.91■□□□□ 0.3
SDF4-205ENST00000465727 WNT2P09544 360 aa16.91■□□□□ 0.3
SDF4-205ENST00000465727 APLNRP35414 380 aa16.91■□□□□ 0.3
SDF4-205ENST00000465727 FGF8P55075 233 aaPredicted RBP16.91■□□□□ 0.3
SDF4-205ENST00000465727 MEF2BQ02080 365 aaPredicted RBP16.91■□□□□ 0.3
SDF4-205ENST00000465727 NKAIN1Q4KMZ8 207 aa16.91■□□□□ 0.3
SDF4-205ENST00000465727 ZNF774Q6NX45 483 aa16.91■□□□□ 0.3
SDF4-205ENST00000465727 RASL10BQ96S79 203 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms