RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 NEK7Q8TDX7 302 aa13.68□□□□□ -0.22
TOM1-213ENST00000465529 NRG4Q8WWG1 115 aa13.68□□□□□ -0.22
TOM1-213ENST00000465529 RPEQ96AT9 228 aa13.68□□□□□ -0.22
TOM1-213ENST00000465529 RBMXL1Q96E39 390 aaKnown RBP13.68□□□□□ -0.22
TOM1-213ENST00000465529 TMEM30CPA0ZSE6 113 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 C15orf65H3BRN8 121 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 GTF2F2P13984 249 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 AQP4P55087 323 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 MPV17LQ2QL34 196 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 C9orf152Q5JTZ5 239 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 AWAT2Q6E213 333 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 C16orf82Q7Z2V1 217 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 LINC00596Q86U02 117 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 DRAM1Q8N682 238 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 CREB3L1Q96BA8 519 aa13.67□□□□□ -0.22
TOM1-213ENST00000465529 PAK1IP1Q9NWT1 392 aaPredicted RBP13.67□□□□□ -0.22
TOM1-213ENST00000465529 TGP01266 2768 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A18PA6NE21 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A16PA6NEW6 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A20PA6NIJ5 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A9PA6NNJ1 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A12PA8MX19 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A5PA8MXJ8 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 ZNF780AO75290 641 aaPredicted RBP13.66□□□□□ -0.22
TOM1-213ENST00000465529 PRB2P02812 416 aaPredicted RBP13.66□□□□□ -0.22
TOM1-213ENST00000465529 CDK1P06493 297 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A15PP0C7V4 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A13PP0C7W8 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A14PP0C7W9 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 FAM90A24PP0C7X0 464 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 MNDAP41218 407 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 REG1BP48304 166 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 ARHGDIBP52566 201 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 GP2P55259 537 aaKnown RBP13.66□□□□□ -0.22
TOM1-213ENST00000465529 TCTEX1D4Q5JR98 221 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 ZNF497Q6ZNH5 498 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 C5orf24Q7Z6I8 188 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 OR5AU1Q8NGC0 362 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 ARL11Q969Q4 196 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 R3HDM4Q96D70 268 aa13.66□□□□□ -0.22
TOM1-213ENST00000465529 RCC2Q9P258 522 aaKnown RBP13.66□□□□□ -0.22
TOM1-213ENST00000465529 AMMECR1Q9Y4X0 333 aaPredicted RBP13.66□□□□□ -0.22
TOM1-213ENST00000465529 OOSP1A8MZH6 123 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 PTGES3LE9PB15 166 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 AIPO00170 330 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 MT-ND4P03905 459 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
TOM1-213ENST00000465529 MADCAM1Q13477 382 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 HNF4GQ14541 408 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 BEAN1Q3B7T3 259 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 C6orf141Q5SZD1 244 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 CCDC144NLQ6NUI1 221 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 OR4K15Q8NH41 348 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 FAM46BQ96A09 425 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 AKR1E2Q96JD6 320 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 SELENOIQ9C0D9 397 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 KCNK15Q9H427 330 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 ERGIC3Q9Y282 383 aa13.65□□□□□ -0.22
TOM1-213ENST00000465529 LSM2Q9Y333 95 aaKnown RBP13.65□□□□□ -0.22
TOM1-213ENST00000465529 IGHV3-72A0A0B4J1Y9 119 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 SDCBPO00560 298 aaPredicted RBP13.64□□□□□ -0.23
TOM1-213ENST00000465529 SLC31A2O15432 143 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 CRTAPO75718 401 aaPredicted RBP13.64□□□□□ -0.23
TOM1-213ENST00000465529 CD1AP06126 327 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 MGMTP16455 207 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 LOXL3P58215 753 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 CD83Q01151 205 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 HES1Q14469 280 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 SIGIRRQ6IA17 410 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 RAB12Q6IQ22 244 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 OR10A7Q8NGE5 316 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 OR10X1Q8NGY0 326 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 TMED9Q9BVK6 235 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 VCXQ9H320 206 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 DCLRE1BQ9H816 532 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 GFOD1Q9NXC2 390 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 ETAA1Q9NY74 926 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 MOB4Q9Y3A3 225 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 PEX16Q9Y5Y5 336 aa13.64□□□□□ -0.23
TOM1-213ENST00000465529 DNAH3Q8TD57 4116 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 UBE2QL1A1L167 161 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 C12orf77C9JDV5 145 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 H3BUI4 141 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 HSD17B6O14756 317 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 IGKV1D-33P01593 117 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 IGKV1-33P01594 117 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 TMEM11P17152 192 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 GZMHP20718 246 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 GPR176Q14439 515 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 ACSM3Q53FZ2 586 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 OXLD1Q5BKU9 147 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 SYT6Q5T7P8 510 aaPredicted RBP13.63□□□□□ -0.23
TOM1-213ENST00000465529 OR10K2Q6IF99 312 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 CENPVQ7Z7K6 275 aaPredicted RBP13.63□□□□□ -0.23
TOM1-213ENST00000465529 PRR18Q8N4B5 295 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 OR1L1Q8NH94 360 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 Q96M66 194 aa13.63□□□□□ -0.23
TOM1-213ENST00000465529 MND1Q9BWT6 205 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms