RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PPIAL4EA0A075B759 164 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 PPIAL4DF5H284 164 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 GEMIN2O14893 280 aaKnown RBP14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 PPIAL4FP0DN26 164 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 PRKACAP17612 351 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 FPR2P25090 351 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 FGF12P61328 243 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 SRSF4Q08170 494 aaKnown RBP14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 SURF2Q15527 256 aaPredicted RBP14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 NKAPLQ5M9Q1 402 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 DEFB108BQ8NET1 73 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 PPA2Q9H2U2 334 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 GPR132Q9UNW8 380 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 PPIAL4AQ9Y536 164 aa14.15□□□□□ -0.14
EXOSC3-203ENST00000465229 IGHV3OR15-7A0A075B7D8 119 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 LGALS8O00214 317 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 PPIHO43447 177 aaKnown RBP14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 SLC22A5O76082 557 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 FUT3P21217 361 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 H2BFSP57053 126 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 TSPAN5P62079 268 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 SMIM21Q3B7S5 101 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 PIGYQ3MUY2 71 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 CHRFAM7AQ494W8 412 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 TEX36Q5VZQ5 186 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 LRRC75A-AS1Q8N1F1 130 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 OR5T2Q8NGG2 359 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 MITD1Q8WV92 249 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 CMSS1Q9BQ75 279 aaKnown RBP14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 FAAP24Q9BTP7 215 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 CHIAQ9BZP6 476 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 DNAJB11Q9UBS4 358 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 AK3Q9UIJ7 227 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 TANC2Q9HCD6 1990 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 VPS13CQ709C8 3753 aa14.14□□□□□ -0.15
EXOSC3-203ENST00000465229 C9orf170A2RU37 121 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 OOEPA6NGQ2 149 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 GOSR2O14653 212 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 HLA-AP01891 365 aaKnown RBP14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 MUC1P15941 1255 aaPredicted RBP14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 C4BPBP20851 252 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 DUSP1P28562 367 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 PDLIM4P50479 330 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 C2orf68Q2NKX9 166 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 TMEM128Q5BJH2 165 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 ZNF767PQ75MW2 155 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 FAM90A1Q86YD7 464 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 MARCH1Q8TCQ1 289 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 FAM210AQ96ND0 272 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 SULT4A1Q9BR01 284 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 TMEM165Q9HC07 324 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 WIPI2Q9Y4P8 454 aa14.13□□□□□ -0.15
EXOSC3-203ENST00000465229 RFPL4AA6NLU0 287 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 HMSDA8MTL9 139 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 RFPL4AL1F8VTS6 287 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 DUS4LO95620 317 aaKnown RBP14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 FSTL3O95633 263 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 KNG1P01042 644 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 IGHV2-70P01814 119 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 PSG2P11465 335 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 CD34P28906 385 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 PPP1R1AQ13522 171 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 ZNF146Q15072 292 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 MPV17LQ2QL34 196 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 LGALSLQ3ZCW2 172 aaPredicted RBP14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 AVPI1Q5T686 147 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 AADACL3Q5VUY0 350 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 LINC00596Q86U02 117 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 UXS1Q8NBZ7 420 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 OR5M8Q8NGP6 311 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 RAB1CQ92928 201 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 PHB2Q99623 299 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 EHFQ9NZC4 300 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 ZNF230Q9UIE0 474 aaPredicted RBP14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 ANXA10Q9UJ72 324 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 IGKV1D-17A0A075B6S4 117 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 TRAV38-1A0A0B4J264 116 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 FCGR3AP08637 254 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 IL13RA1P78552 427 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 PDCD1Q15116 288 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 SRSF7Q16629 238 aaKnown RBP eCLIP14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 C11orf88Q6PI97 169 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 C17orf107Q6ZR85 190 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 ANGPTL6Q8NI99 470 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 FAM168AQ92567 244 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 TIMD4Q96H15 378 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 CYYR1Q96J86 154 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 ZNF581Q9P0T4 197 aa14.12□□□□□ -0.15
EXOSC3-203ENST00000465229 SETXQ7Z333 2677 aaKnown RBP14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 MED13LQ71F56 2210 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 A0A0B4J2A0 478 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 TNFRSF13BO14836 293 aaPredicted RBP14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 GYPAP02724 150 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 TFF1P04155 84 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 PRDX2P32119 198 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 MDH2P40926 338 aaKnown RBP14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 GPR6P46095 362 aaPredicted RBP14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 ARPC4P59998 168 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 SPIN3Q5JUX0 258 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 LY6G6FQ5SQ64 297 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms