RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 TMEM158Q8WZ71 300 aa11.17□□□□□ -0.62
LIMD1-203ENST00000465039 KCTD12Q96CX2 325 aaKnown RBP11.17□□□□□ -0.62
LIMD1-203ENST00000465039 KIRREL1Q96J84 757 aa11.17□□□□□ -0.62
LIMD1-203ENST00000465039 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
LIMD1-203ENST00000465039 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.17□□□□□ -0.62
LIMD1-203ENST00000465039 PLEKHJ1Q9NW61 149 aa11.17□□□□□ -0.62
LIMD1-203ENST00000465039 ZNF581Q9P0T4 197 aa11.17□□□□□ -0.62
LIMD1-203ENST00000465039 IGHV3OR16-10A0A075B7F0 116 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 SERPINE3A8MV23 424 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 VGLL3A8MV65 326 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 F2RL2O00254 374 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 SPINT2O43291 252 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 PAHP00439 452 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 RNASE1P07998 156 aaKnown RBP11.16□□□□□ -0.62
LIMD1-203ENST00000465039 LGALS4P56470 323 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 NKAPLQ5M9Q1 402 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 RUSC1-AS1Q66K80 236 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 ZNF782Q6ZMW2 699 aaPredicted RBP11.16□□□□□ -0.62
LIMD1-203ENST00000465039 GPR141Q7Z602 305 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
LIMD1-203ENST00000465039 PNKDQ8N490 385 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 OR5R1Q8NH85 324 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 FAM216AQ8WUB2 273 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 MALSU1Q96EH3 234 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 ZNF48Q96MX3 618 aaPredicted RBP11.16□□□□□ -0.62
LIMD1-203ENST00000465039 NICN1Q9BSH3 213 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 DPAGT1Q9H3H5 408 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 ABRACLQ9P1F3 81 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 DAPK2Q9UIK4 370 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
LIMD1-203ENST00000465039 A0A0A6YYD4 124 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 A0A0U1RQK1 487 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 MEIOCA2RUB1 952 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 OOSP1A8MZH6 123 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 C15orf65H3BRN8 121 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 RAB27BO00194 218 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 DIRAS3O95661 229 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 IGLV1-47P01700 117 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 CEACAM3P40198 252 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 RPL5P46777 297 aaKnown RBP11.15□□□□□ -0.62
LIMD1-203ENST00000465039 DYNLT3P51808 116 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 KLRD1Q13241 179 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 LY6G6FQ5SQ64 297 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 PRAMEF5Q5TYX0 476 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 STEAP3Q658P3 488 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 C6orf201Q7Z4U5 140 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 OR10R2Q8NGX6 335 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 OR9G1Q8NH87 305 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 MRGPRDQ8TDS7 321 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 C22orf15Q8WYQ4 148 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 SLC25A46Q96AG3 418 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 RAB3CQ96E17 227 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 SULT4A1Q9BR01 284 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 MEGF9Q9H1U4 602 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 KCNK15Q9H427 330 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 IDI2-AS1Q9NZ38 188 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 KCNIP1Q9NZI2 227 aa11.15□□□□□ -0.62
LIMD1-203ENST00000465039 AMMECR1Q9Y4X0 333 aaPredicted RBP11.15□□□□□ -0.62
LIMD1-203ENST00000465039 BTBD17A6NE02 478 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 SOCS1O15524 211 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 VENTXO95231 258 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 MELTFP08582 738 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 COX7A1P24310 79 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 HTR1DP28221 377 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 SSTR5P35346 364 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 VEGFCP49767 419 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 ARHGDIBP52566 201 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 PRRX1P54821 245 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 UBA52P62987 128 aaKnown RBP11.14□□□□□ -0.63
LIMD1-203ENST00000465039 MXD1Q05195 221 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 BAMBIQ13145 260 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 CTF1Q16619 201 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 ZNF880Q6PDB4 577 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 LIAT1Q6ZQX7 453 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 Q6ZTK2 550 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 ABHD12Q8N2K0 398 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 ZDHHC22Q8N966 263 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 MRPL30Q8TCC3 161 aaKnown RBP11.14□□□□□ -0.63
LIMD1-203ENST00000465039 DYRK2Q92630 601 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 RHBDL2Q9NX52 303 aa11.14□□□□□ -0.63
LIMD1-203ENST00000465039 CUBNO60494 3623 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 STAB1Q9NY15 2570 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 UBE2QL1A1L167 161 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 C12orf77C9JDV5 145 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 MFNGO00587 321 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 ARG1P05089 322 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 SLC2A2P11168 524 aaPredicted RBP11.13□□□□□ -0.63
LIMD1-203ENST00000465039 HIST1H1DP16402 221 aaKnown RBP11.13□□□□□ -0.63
LIMD1-203ENST00000465039 IER3P46695 156 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 TMEM50BP56557 158 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 HTD2P86397 168 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 HMGN3Q15651 99 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 SRSF7Q16629 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
LIMD1-203ENST00000465039 HLA-DRB5Q30154 266 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 BRICD5Q6PL45 260 aa11.13□□□□□ -0.63
LIMD1-203ENST00000465039 LINC00311Q8N616 119 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms