RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 ZNF880Q6PDB4 577 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 WDR74Q6RFH5 385 aaPredicted RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 ZIC4Q8N9L1 334 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 TMEM170AQ8WVE7 144 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 PINX1Q96BK5 328 aaKnown RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 RASL10BQ96S79 203 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 DDA1Q9BW61 102 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 MRPL37Q9BZE1 423 aaKnown RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 OR14J1Q9UGF5 321 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 CHD9Q3L8U1 2897 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 IGKV1D-13A0A0B4J2D9 117 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 ZNF816-ZNF321PA0A0X1KG74 233 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 EPOPA6NHQ4 379 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 CCDC85CA6NKD9 419 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 KBTBD11O94819 623 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 CNOT4O95628 575 aaKnown RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 IGKV1-13P0DP09 117 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 S100GP29377 79 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 CCKARP32238 428 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 MDH2P40926 338 aaKnown RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 NXPH1P58417 271 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 FAM3BP58499 235 aaPredicted RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 ZNF92Q03936 586 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 SLC10A1Q14973 349 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 LRRC75BQ2VPJ9 315 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 TMEM41BQ5BJD5 291 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 PLCXD3Q63HM9 321 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 ZNF774Q6NX45 483 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 C16orf82Q7Z2V1 217 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 TGIF2LXQ8IUE1 241 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 SAXO1Q8IYX7 474 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 C7orf61Q8IZ16 206 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 ZNF525Q8N782 197 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 NAT6Q93015 286 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 SF3B5Q9BWJ5 86 aaKnown RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 TMEM38BQ9NVV0 291 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 GAB2Q9UQC2 676 aa6.26□□□□□ -1.41
USP48-206ENST00000464577 CHCHD2Q9Y6H1 151 aaPredicted RBP6.26□□□□□ -1.41
USP48-206ENST00000464577 XKRY2A2RUG3 117 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 MAP1LC3B2A6NCE7 125 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 CEBPZOSA8MTT3 80 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 PPP5D1E7EU14 171 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 TMEM250H0YL14 139 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 TOX3O15405 576 aaPredicted RBP6.25□□□□□ -1.41
USP48-206ENST00000464577 DNPH1O43598 174 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 PGLYRP1O75594 196 aaPredicted RBP6.25□□□□□ -1.41
USP48-206ENST00000464577 IL18BPO95998 194 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 TYMSP04818 313 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 CYC1P08574 325 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 GLB1P16278 677 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 F2RP25116 425 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 TMEM267Q0VDI3 215 aaPredicted RBP6.25□□□□□ -1.41
USP48-206ENST00000464577 CLN3Q13286 438 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 HERPUD1Q15011 391 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 TMEM241Q24JQ0 296 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 ACOT6Q3I5F7 207 aaPredicted RBP6.25□□□□□ -1.41
USP48-206ENST00000464577 LCN15Q6UWW0 184 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 Q6ZS52 159 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 C5orf24Q7Z6I8 188 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 ZNF611Q8N823 705 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 OR51G1Q8NGK1 321 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 CPT1CQ8TCG5 803 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 RLN3Q8WXF3 142 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 LSM10Q969L4 123 aaKnown RBP6.25□□□□□ -1.41
USP48-206ENST00000464577 SPSB4Q96A44 273 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 GPR146Q96CH1 333 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 ADGRG7Q96K78 797 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 HIST1H2AAQ96QV6 131 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 OR5B12Q96R08 314 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 SMIM7Q9BQ49 75 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 RSG1Q9BU20 258 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 DEFB126Q9BYW3 111 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 MAP1LC3BQ9GZQ8 125 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 CCL28Q9NRJ3 127 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 C19orf25Q9UFG5 118 aaPredicted RBP6.25□□□□□ -1.41
USP48-206ENST00000464577 PRSS50Q9UI38 385 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 LAMP3Q9UQV4 416 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 TIMM9Q9Y5J7 89 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 NCOA6Q14686 2063 aaPredicted RBP6.25□□□□□ -1.41
USP48-206ENST00000464577 ARID1AO14497 2285 aa6.25□□□□□ -1.41
USP48-206ENST00000464577 LRP5LA4QPB2 252 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 H7BYZ3 331 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 HRASP01112 189 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 HLA-HP01893 362 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 SNRPCP09234 159 aaKnown RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 SCTP09683 121 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 METTL15P1P0C7V9 234 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 FGF12P61328 243 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 RPS18P62269 152 aaKnown RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 HBG1P69891 147 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 HBG2P69892 147 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 PRDX4Q13162 271 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 PDCD1Q15116 288 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 ADIRFQ15847 76 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 USF2Q15853 346 aaPredicted RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 BSXQ3C1V8 233 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 ACTL10Q5JWF8 245 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 SYT13Q7L8C5 426 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 SSX7Q7RTT5 188 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 CALHM1Q8IU99 346 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms